RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 BTNL2Q9UIR0 455 aa11.65□□□□□ -0.54
HSPG2-213ENST00000498495 DKKL1Q9UK85 242 aa11.65□□□□□ -0.54
HSPG2-213ENST00000498495 ZNF407Q9C0G0 2248 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 NCKAP5O14513 1909 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 RNF103-CHMP3A0A140T963 221 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 POLR3GO15318 223 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-213ENST00000498495 NDUFB5O43674 189 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 CLDN14O95500 239 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 PGRP06401 933 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 TBXA2RP21731 343 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 IL12AP29459 219 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 PTGER4P35408 488 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 DSCR4P56555 118 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-213ENST00000498495 NUP107P57740 925 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 CRYZQ08257 329 aaKnown RBP11.64□□□□□ -0.55
HSPG2-213ENST00000498495 LRRC74AQ0VAA2 488 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-213ENST00000498495 HIST2H2BCQ6DN03 193 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 ENPP6Q6UWR7 440 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 APOOLQ6UXV4 268 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 IFNEQ86WN2 208 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 RPRMLQ8N4K4 120 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 MARVELD2Q8N4S9 558 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 OR2M3Q8NG83 312 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 CA5BP1Q8WTZ4 195 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 ASB5Q8WWX0 329 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 SLC35G5Q96KT7 338 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 MARK4Q96L34 752 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 OR7D2Q96RA2 312 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 PANX1Q96RD7 426 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 TTYH2Q9BSA4 534 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 RTN4RQ9BZR6 473 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 OR2B2Q9GZK3 357 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 HOXD1Q9GZZ0 328 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 HHATLQ9HCP6 504 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 CAMK2AQ9UQM7 478 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 KLF2Q9Y5W3 355 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-213ENST00000498495 KCNE3Q9Y6H6 103 aa11.64□□□□□ -0.55
HSPG2-213ENST00000498495 DIDO1Q9BTC0 2240 aaKnown RBP11.63□□□□□ -0.55
HSPG2-213ENST00000498495 C17orf51A8MQB3 221 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 ALG1L2C9J202 215 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 C9JVG2 144 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 SCDO00767 359 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 ZIC3O60481 467 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 OXSR1O95747 527 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-213ENST00000498495 IL6P05231 212 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 NGFRP08138 427 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 GLI4P10075 376 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 HK1P19367 917 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 TCEA1P23193 301 aaKnown RBP11.63□□□□□ -0.55
HSPG2-213ENST00000498495 HTR1EP28566 365 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 CHI3L1P36222 383 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-213ENST00000498495 IDH3AP50213 366 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 RPS26P62854 115 aaKnown RBP11.63□□□□□ -0.55
HSPG2-213ENST00000498495 DCST2Q5T1A1 773 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 RTL6Q6ICC9 239 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 AAGABQ6PD74 315 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 ZNF621Q6ZSS3 439 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 ZAR1Q86SH2 424 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 ULK2Q8IYT8 1036 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 TRIML2Q8N7C3 387 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 FADS6Q8N9I5 356 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 OR5D16Q8NGK9 328 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 GOT1L1Q8NHS2 421 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-213ENST00000498495 WDYHV1Q96HA8 205 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 SFXN2Q96NB2 322 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 CCDC115Q96NT0 180 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 SLC35A5Q9BS91 424 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 PRDM14Q9GZV8 571 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 TCF7L2Q9NQB0 619 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 EXD2Q9NVH0 621 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 ZIM2Q9NZV7 527 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 RNF6Q9Y252 685 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 RPH3AQ9Y2J0 694 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-213ENST00000498495 FAM215AQ9Y5M1 114 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 DNAJC13O75165 2243 aa11.63□□□□□ -0.55
HSPG2-213ENST00000498495 NUP214P35658 2090 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-213ENST00000498495 FREM3P0C091 2139 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 CCDC154A6NI56 674 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 FAM47E-STBD1D6RA91 191 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 GMFGO60234 142 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 EPPINO95925 133 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 AGR2O95994 175 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 CHMP24386 653 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 MSX1P28360 303 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 STARP49675 285 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 AQP5P55064 265 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 CASP9P55211 416 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 STX1BP61266 288 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 SRYQ05066 204 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 GANABQ14697 944 aaKnown RBP11.62□□□□□ -0.55
HSPG2-213ENST00000498495 ZNF630Q2M218 657 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-213ENST00000498495 ATAD3BQ5T9A4 648 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 MISPQ8IVT2 679 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 MIER2Q8N344 545 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 GATSQ8NAP1 163 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 ZNF527Q8NB42 609 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 XAGE5Q8WWM1 108 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms