RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SLCO1B1Q9Y6L6 691 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 ANKRD30BQ9BXX2 1392 aa2.18□□□□□ -2.06
SMC4-227ENST00000497984 LRRK1Q38SD2 2015 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 H3BTX0 84 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 TRIM3O75382 744 aaPredicted RBP2.17□□□□□ -2.06
SMC4-227ENST00000497984 ZNF254O75437 659 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 CA11O75493 328 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 BBOX1O75936 387 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 WISP3O95389 354 aaPredicted RBP2.17□□□□□ -2.06
SMC4-227ENST00000497984 ANP32DO95626 131 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 JCHAINP01591 159 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 CHRNA1P02708 482 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 HPNP05981 417 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 PTPN6P29350 595 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 COPB2P35606 906 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 RPL4P36578 427 aaKnown RBP2.17□□□□□ -2.06
SMC4-227ENST00000497984 GPC3P51654 580 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 RPS8P62241 208 aaKnown RBP2.17□□□□□ -2.06
SMC4-227ENST00000497984 LRRC63Q05C16 580 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 GFPT1Q06210 699 aaPredicted RBP2.17□□□□□ -2.06
SMC4-227ENST00000497984 EGFEM1PQ0D2K5 195 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 CARTPTQ16568 116 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 LRRC36Q1X8D7 754 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 BTNL3Q6UXE8 466 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 C17orf82Q86X59 251 aaPredicted RBP2.17□□□□□ -2.06
SMC4-227ENST00000497984 BPIFB2Q8N4F0 458 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 ZNF561Q8N587 486 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 ARFGAP2Q8N6H7 521 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 TPRX1Q8N7U7 411 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 NEK11Q8NG66 645 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 EXOC6Q8TAG9 804 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 SNX21Q969T3 373 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 TADA1Q96BN2 335 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 CCDC43Q96MW1 224 aaKnown RBP2.17□□□□□ -2.06
SMC4-227ENST00000497984 PLEKHF1Q96S99 279 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 SLC25A39Q9BZJ4 359 aaPredicted RBP2.17□□□□□ -2.06
SMC4-227ENST00000497984 SIRPDQ9H106 197 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 PTGES2Q9H7Z7 377 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 MARCH5Q9NX47 278 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 NDUFA13Q9P0J0 144 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 ANKMY1Q9P2S6 941 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 SPRR3Q9UBC9 169 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 METP08581 1390 aa2.17□□□□□ -2.06
SMC4-227ENST00000497984 TTC26A0AVF1 554 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 H3BMH7 237 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 PPIHO43447 177 aaKnown RBP2.16□□□□□ -2.06
SMC4-227ENST00000497984 PGK2P07205 417 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 PSG2P11465 335 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 BCKDHAP12694 445 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 GCFC2P16383 781 aaKnown RBP2.16□□□□□ -2.06
SMC4-227ENST00000497984 PLOD1Q02809 727 aaPredicted RBP2.16□□□□□ -2.06
SMC4-227ENST00000497984 DPYSL3Q14195 570 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 LASP1Q14847 261 aaKnown RBP2.16□□□□□ -2.06
SMC4-227ENST00000497984 HERPUD1Q15011 391 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 UBE2V2Q15819 145 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 HFEQ30201 348 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 ETFRF1Q6IPR1 90 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 IL34Q6ZMJ4 242 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 SERPINA9Q86WD7 417 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 H1FOOQ8IZA3 346 aaPredicted RBP2.16□□□□□ -2.06
SMC4-227ENST00000497984 OR9A1PQ8NGU1 263 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 TAF4BQ92750 862 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 ART4Q93070 314 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 PSMG2Q969U7 264 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 MARC2Q969Z3 335 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 HAVCR1Q96D42 359 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 FEM1AQ9BSK4 669 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 OR51J1Q9H342 316 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 NTN4Q9HB63 628 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 KCNN3Q9UGI6 736 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.16□□□□□ -2.06
SMC4-227ENST00000497984 ARHGAP21Q5T5U3 1957 aa2.16□□□□□ -2.06
SMC4-227ENST00000497984 SLC9B1P1A6NJY1 282 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 ERVV-1B6SEH8 477 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 ZBTB14O43829 449 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 VEGFDO43915 354 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 SCRG1O75711 98 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 OLFM2O95897 454 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 VDRP11473 427 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 H2AFXP16104 143 aaPredicted RBP2.15□□□□□ -2.07
SMC4-227ENST00000497984 CCNA2P20248 432 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 HNRNPA2B1P22626 353 aaKnown RBP2.15□□□□□ -2.07
SMC4-227ENST00000497984 CCNE1P24864 410 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 ACTN3Q08043 901 aaPredicted RBP2.15□□□□□ -2.07
SMC4-227ENST00000497984 SLX4IPQ5VYV7 408 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 PVRIGQ6DKI7 326 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 BATF2Q8N1L9 274 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 SPC24Q8NBT2 197 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 OR2A12Q8NGT7 310 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 IL1F10Q8WWZ1 152 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 ARNTL2Q8WYA1 636 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 KRT35Q92764 455 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 ADIPOR1Q96A54 375 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 STARD4Q96DR4 205 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 CABS1Q96KC9 395 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 RPAP3Q9H6T3 665 aaPredicted RBP2.15□□□□□ -2.07
SMC4-227ENST00000497984 APMAPQ9HDC9 416 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 CWC25Q9NXE8 425 aaPredicted RBP2.15□□□□□ -2.07
SMC4-227ENST00000497984 OR1A1Q9P1Q5 309 aa2.15□□□□□ -2.07
SMC4-227ENST00000497984 DCDC2Q9UHG0 476 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms