RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TRNT1Q96Q11 434 aaKnown RBP18.38■□□□□ 0.53
CTSD-206ENST00000497544 NODALQ96S42 347 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 GPATCH1Q9BRR8 931 aaKnown RBP18.38■□□□□ 0.53
CTSD-206ENST00000497544 KAT8Q9H7Z6 458 aaKnown RBP18.38■□□□□ 0.53
CTSD-206ENST00000497544 METTL7AQ9H8H3 244 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 POLE3Q9NRF9 147 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 CALML5Q9NZT1 146 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 B3GNT3Q9Y2A9 372 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 KLF13Q9Y2Y9 288 aaPredicted RBP18.38■□□□□ 0.53
CTSD-206ENST00000497544 WDR45Q9Y484 360 aa18.38■□□□□ 0.53
CTSD-206ENST00000497544 CHCHD2Q9Y6H1 151 aaPredicted RBP18.38■□□□□ 0.53
CTSD-206ENST00000497544 PRAMEF27A3QJZ7 478 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 BCHEP06276 602 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 NUDT7P0C024 238 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 T-ENOLP0DO92 83 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 CCL3P10147 92 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 HPGDP15428 266 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 CNR1P21554 472 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 ZNF169Q14929 603 aaPredicted RBP18.37■□□□□ 0.53
CTSD-206ENST00000497544 GPR68Q15743 365 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 SLC15A3Q8IY34 581 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 SLC38A5Q8WUX1 472 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 HOXD1Q9GZZ0 328 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 PIF1Q9H611 641 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 A4GALTQ9NPC4 353 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 CNOT11Q9UKZ1 510 aaKnown RBP18.37■□□□□ 0.53
CTSD-206ENST00000497544 PCDHGB6Q9Y5F9 930 aa18.37■□□□□ 0.53
CTSD-206ENST00000497544 OTOGQ6ZRI0 2925 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 C5orf58C9J3I9 102 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 KLRC4-KLRK1H3BQV0 150 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 ICOSLGO75144 302 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 H6PDO95479 791 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 TFPTP0C1Z6 253 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 CASP3P42574 277 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 CRISP3P54108 245 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 SLC25A3Q00325 362 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 GRAMD1BQ3KR37 738 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 PLEKHN1Q494U1 663 aaPredicted RBP18.36■□□□□ 0.53
CTSD-206ENST00000497544 FLYWCH1Q4VC44 716 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 TBCELQ5QJ74 424 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 PRAMEF20Q5VT98 475 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 ZNF787Q6DD87 383 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 C8orf82Q6P1X6 216 aaPredicted RBP18.36■□□□□ 0.53
CTSD-206ENST00000497544 LRRC74BQ6ZQY2 392 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 GALNTL5Q7Z4T8 443 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 ZAR1Q86SH2 424 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 SERPINA11Q86U17 422 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 C10orf111Q8N326 155 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 FBXW8Q8N3Y1 598 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 METTL25Q8N6Q8 603 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 SCMH1Q96GD3 660 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 HES7Q9BYE0 225 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 SETD2Q9BYW2 2564 aaPredicted RBP18.36■□□□□ 0.53
CTSD-206ENST00000497544 ZNF350Q9GZX5 532 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 TMEM38AQ9H6F2 299 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 SH2D2AQ9NP31 389 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 UBQLN4Q9NRR5 601 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 MKLN1Q9UL63 735 aa18.36■□□□□ 0.53
CTSD-206ENST00000497544 ANKRD33BA6NCL7 494 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 PRAMEF25A6NGN4 478 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 PEX1O43933 1283 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 NME2P1O60361 137 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 FCMRO60667 390 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 GUSBP08236 651 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 ARAFP10398 606 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 NME2P22392 152 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 SLC7A2P52569 658 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 ATP12AP54707 1039 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 CDK6Q00534 326 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 CHRNEQ04844 493 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 RBBP4Q09028 425 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 FUT5Q11128 374 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 KLRB1Q12918 225 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 ZNF630Q2M218 657 aaPredicted RBP18.35■□□□□ 0.53
CTSD-206ENST00000497544 NADK2Q4G0N4 442 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 SLC6A19Q695T7 634 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 SLC30A6Q6NXT4 461 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 TMEM81Q6P7N7 255 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 C6orf89Q6UWU4 347 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 OLIG3Q7RTU3 272 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 PGAM4Q8N0Y7 254 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 ZNF619Q8N2I2 560 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 ZNF527Q8NB42 609 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 FAM98AQ8NCA5 519 aaKnown RBP18.35■□□□□ 0.53
CTSD-206ENST00000497544 C11orf65Q8NCR3 313 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 OR4C3Q8NH37 302 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 NFKBIDQ8NI38 313 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 MAL2Q969L2 176 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 PNPLA2Q96AD5 504 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 TMEM19Q96HH6 336 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 SPATA9Q9BWV2 254 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 MTHFD2LQ9H903 347 aaPredicted RBP18.35■□□□□ 0.53
CTSD-206ENST00000497544 CMTM6Q9NX76 183 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 ADA2Q9NZK5 511 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 KLRF1Q9NZS2 232 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 FLRT3Q9NZU0 649 aa18.35■□□□□ 0.53
CTSD-206ENST00000497544 NPIPA5A0A0B4J1W7 369 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 A0A0G2JPF8 293 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 HNRNPCL2B2RXH8 293 aa18.34■□□□□ 0.53
CTSD-206ENST00000497544 HNRNPCL3B7ZW38 293 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms