RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 DUSP5Q16690 384 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 NKAIN1Q4KMZ8 207 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 FAM98BQ52LJ0 330 aaKnown RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ZNF628Q5EBL2 1059 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 STPG1Q5TH74 334 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 GARNL3Q5VVW2 1013 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 HMBOX1Q6NT76 420 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ERICH5Q6P6B1 374 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 AAGABQ6PD74 315 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ISLR2Q6UXK2 745 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 TMEM64Q6YI46 380 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 LANCL3Q6ZV70 420 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 SERPINA11Q86U17 422 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 PPP1R3BQ86XI6 285 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 AQP12AQ8IXF9 295 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ZNF595Q8IYB9 648 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 NLGN4XQ8N0W4 816 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 PQLC1Q8N2U9 271 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 NATD1Q8N6N6 113 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ZNF614Q8N883 585 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ENDOVQ8N8Q3 282 aaKnown RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ADAMTS15Q8TE58 950 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 SLC38A5Q8WUX1 472 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 TAMM41Q96BW9 452 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ARSGQ96EG1 525 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 NEIL1Q96FI4 390 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 RMND5BQ96G75 393 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 SLC35A4Q96G79 324 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 RBM18Q96H35 190 aaKnown RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 TMEM19Q96HH6 336 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ZNF285Q96NJ3 590 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 COL21A1Q96P44 957 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 GAL3ST4Q96RP7 486 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 CHID1Q9BWS9 393 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 UGT2B28Q9BY64 529 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ASPSCR1Q9BZE9 553 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ULBP3Q9BZM4 244 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 LIN28AQ9H9Z2 209 aaKnown RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 CTPS2Q9NRF8 586 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 SLC22A11Q9NSA0 550 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 CCM2LQ9NUG4 571 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ADPRHL2Q9NX46 363 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 TAS2R7Q9NYW3 318 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 MAT2BQ9NZL9 334 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 AKAP7Q9P0M2 348 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 STX18Q9P2W9 335 aaKnown RBP4.42□□□□□ -1.7
CMSS1-209ENST00000497345 RHCGQ9UBD6 479 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 RPS6KA6Q9UK32 745 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 AP3M1Q9Y2T2 418 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 DTNAQ9Y4J8 743 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 PCDHGB2Q9Y5G2 931 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 COL6A3P12111 3177 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 KIF26BQ2KJY2 2108 aa4.42□□□□□ -1.7
CMSS1-209ENST00000497345 ASCC3Q8N3C0 2202 aaKnown RBP4.41□□□□□ -1.7
CMSS1-209ENST00000497345 FAM90A27PA6NNH2 459 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 A8MVJ9 347 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 H0YIG0 161 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 H3BMH7 237 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 MASP2O00187 686 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 NTN3O00634 580 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-209ENST00000497345 TOX3O15405 576 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-209ENST00000497345 FRS3O43559 492 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 GMFGO60234 142 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 ALOX12BO75342 701 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 E2F6O75461 281 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 GCM2O75603 506 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-209ENST00000497345 BMP10O95393 424 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 H6PDO95479 791 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 LDLRP01130 860 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 GPIP06744 558 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 CHRM4P08173 479 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 TFPTP0C1Z6 253 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 ANKRD34CP0C6C1 535 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 JMJD7P0C870 316 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 ZNF23P17027 643 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 PTNP21246 168 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 AGXTP21549 392 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 PRKACGP22612 351 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 FASP25445 335 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 VHLP40337 213 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 STT3AP46977 705 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 EFNA3P52797 238 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 EMP2P54851 167 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 HPCAP84074 193 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 HOXC5Q00444 222 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 ZFP36L1Q07352 338 aaKnown RBP4.41□□□□□ -1.7
CMSS1-209ENST00000497345 MGAT2Q10469 447 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 FADDQ13158 208 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 DUSP8Q13202 625 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 SQSTM1Q13501 440 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 MLC1Q15049 377 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 TAF11Q15544 211 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 NRF1Q16656 503 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 ZNF630Q2M218 657 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-209ENST00000497345 PRICKLE4Q2TBC4 344 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 SFT2D3Q587I9 215 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 C3orf38Q5JPI3 329 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 OTUD3Q5T2D3 398 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-209ENST00000497345 ATAD3BQ5T9A4 648 aa4.41□□□□□ -1.7
CMSS1-209ENST00000497345 HES3Q5TGS1 186 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms