RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 METTL15P1P0C7V9 234 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 UBCP0CG48 685 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 IL7P13232 177 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 EGR1P18146 543 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DRD1P21728 446 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ACP1P24666 158 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DPP4P27487 766 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DDTP30046 118 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GPR12P47775 334 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PSMD8P48556 350 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LHX1P48742 406 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PXNP49023 591 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FLT3LGP49771 235 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RPL14P50914 215 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SUOXP51687 545 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 XKP51811 444 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 KCNK10P57789 538 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TAS2R39P59534 338 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RPL7AP62424 266 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HERV-K104P63124 156 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 DYNLL1P63167 89 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PITPNAQ00169 270 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GTF2BQ00403 316 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RGS1Q08116 209 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ARHGEF7Q14155 803 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR8G1Q15617 311 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM249Q2WGJ8 235 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 C18orf21Q32NC0 220 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PTCHD3Q3KNS1 767 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 AGAP6Q5VW22 663 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 RAET1LQ5VY80 246 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FBXW9Q5XUX1 488 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TRIQKQ629K1 86 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TIGD3Q6B0B8 471 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR8G2PQ6IF36 304 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 REEP3Q6NUK4 255 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SERPINA13PQ6UXR4 307 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ESPNLQ6ZVH7 1005 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PIWIL4Q7Z3Z4 852 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GDF7Q7Z4P5 450 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 BMP8AQ7Z5Y6 402 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LYG2Q86SG7 212 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ISCA2Q86U28 154 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 NOXA1Q86UR1 476 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CATSPER3Q86XQ3 398 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 VRK3Q8IV63 474 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FUNDC1Q8IVP5 155 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CCDC60Q8IWA6 550 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 UBQLNLQ8IYU4 475 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 MMP21Q8N119 569 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF383Q8NA42 475 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HSD17B11Q8NBQ5 300 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 UXS1Q8NBZ7 420 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM116Q8NCL8 245 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR4M2Q8NGB6 313 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR4K15Q8NH41 348 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OR51A7Q8NH64 312 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM46BQ96A09 425 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 OTUB1Q96FW1 271 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CERS2Q96G23 380 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HIST1H2AHQ96KK5 128 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 C4orf36Q96KX1 117 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 AGAP4Q96P64 663 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FIZ1Q96SL8 496 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HIST1H2AJQ99878 128 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PIGQQ9BRB3 760 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC30A2Q9BRI3 323 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC35A5Q9BS91 424 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 FNDC11Q9BVV2 318 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 MAGT1Q9H0U3 335 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 NELFAQ9H3P2 528 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 NT5DC2Q9H857 520 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 BCO1Q9HAY6 547 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF160Q9HCG1 818 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HEYLQ9NQ87 328 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 LYARQ9NX58 379 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM9Q9P0T7 183 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SEMA5BQ9P283 1151 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 KLQ9UEF7 1012 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ZDHHC8Q9ULC8 765 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ICKQ9UPZ9 632 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 KCNK6Q9Y257 313 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 GSTK1Q9Y2Q3 226 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PKP3Q9Y446 797 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 PCDHB7Q9Y5E2 793 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HS3ST3A1Q9Y663 406 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SLCO1B1Q9Y6L6 691 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 XIRP1Q702N8 1843 aaKnown RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CHD5Q8TDI0 1954 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 SYNMO15061 1565 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 NEDD4P46934 1319 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 ADGRA3Q8IWK6 1321 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 KIAA0556O60303 1618 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 USP47Q96K76 1375 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM233B4DJY2 109 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 TSTD3H0UI37 97 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 CHADO15335 359 aa2.89□□□□□ -1.95
SNRNP48-202ENST00000496946 BCAT2O15382 392 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms