RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CLEC12AQ5QGZ9 265 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 MRPL2Q5T653 305 aaKnown RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 PAQR6Q6TCH4 344 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF620Q6ZNG0 422 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 GDPGP1Q6ZNW5 385 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 SNX29P2Q8IUI4 249 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 GALNT12Q8IXK2 581 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 OR4Q3Q8NH05 313 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 ANKRD9Q96BM1 317 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 CTHRC1Q96CG8 243 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 RNFT2Q96EX2 444 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 GAS2L1Q99501 681 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 ORAI3Q9BRQ5 295 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 FGF20Q9NP95 211 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 EXOSC4Q9NPD3 245 aaKnown RBP12.14□□□□□ -0.47
GARNL3-220ENST00000496711 IL20Q9NYY1 176 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 NLGN3Q9NZ94 848 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 CACNA1IQ9P0X4 2223 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 STUB1Q9UNE7 303 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 GPR52Q9Y2T5 361 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 PEX16Q9Y5Y5 336 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 SLCO1B1Q9Y6L6 691 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 CDH10Q9Y6N8 788 aa12.14□□□□□ -0.47
GARNL3-220ENST00000496711 FUOMA2VDF0 154 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 TRAPPC13A5PLN9 417 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 PEX12O00623 359 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 COQ9O75208 318 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 PSMA1P25786 263 aaKnown RBP12.13□□□□□ -0.47
GARNL3-220ENST00000496711 ETV5P41161 510 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 ETV1P50549 477 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 GAS1P54826 345 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 TMEM44Q2T9K0 475 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 PGGHGQ32M88 737 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 SLC30A6Q6NXT4 461 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 ARHGEF39Q8N4T4 335 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 CLDN22Q8N7P3 220 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 TSTD1Q8NFU3 115 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 OR9A4Q8NGU2 314 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 PMM1Q92871 262 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 POLE3Q9NRF9 147 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 MED17Q9NVC6 651 aa12.13□□□□□ -0.47
GARNL3-220ENST00000496711 NPIPA5A0A0B4J1W7 369 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 TMEM129A0AVI4 362 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CDHR4A6H8M9 788 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 SAGE2PA6NJ88 616 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CHURC1-FNTBB4DL54 471 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 NPIPA7E9PJI5 369 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 SURF4O15260 269 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 OR10H2O60403 315 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 BRINP1O60477 761 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 HNRNPCP07910 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
GARNL3-220ENST00000496711 SLC35E2P0CK97 266 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 NPIPA8P0DM63 369 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CHRNB1P11230 501 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 SRFP11831 508 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 HTR2AP28223 471 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 GABRA3P34903 492 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 MTNR1AP48039 350 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 BCAP31P51572 246 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 MAZP56270 477 aaKnown RBP12.12□□□□□ -0.47
GARNL3-220ENST00000496711 WNT4P56705 351 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 PRKCDQ05655 676 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 FIGNL1Q6PIW4 674 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 VWA5B2Q8N398 1253 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 AVL9Q8NBF6 648 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 RFKQ969G6 155 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 PRSS27Q9BQR3 290 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 SLC2A4RGQ9NR83 387 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 FBXO34Q9NWN3 711 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
GARNL3-220ENST00000496711 KCNE5Q9UJ90 142 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 EXOSC1Q9Y3B2 195 aaKnown RBP12.12□□□□□ -0.47
GARNL3-220ENST00000496711 IGHV1OR15-9A0A0B4J2B8 117 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 GXYLT2A0PJZ3 443 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 HYKKA2RU49 373 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 MBTPS2O43462 519 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CHST10O43529 356 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 FMO6PO60774 539 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF217O75362 1048 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 UPK1BO75841 260 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 NKX2-2O95096 273 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CBX7O95931 251 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 PRG2P13727 222 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CDH11P55287 796 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 SKP1P63208 163 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF45Q02386 682 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 SMAD4Q13485 552 aaKnown RBP12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-220ENST00000496711 PLEKHG7Q6ZR37 379 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 PHC2Q8IXK0 858 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 FAM160A2Q8N612 972 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-220ENST00000496711 OR2T33Q8NG76 320 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 OR52R1Q8NGF1 315 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 RLN3Q8WXF3 142 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 HOXB13Q92826 284 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-220ENST00000496711 CNPPD1Q9BV87 410 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 ASPNQ9BXN1 380 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 TPSD1Q9BZJ3 242 aa12.12□□□□□ -0.47
GARNL3-220ENST00000496711 C2orf42Q9NWW7 574 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms