RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 FCGR3AP08637 254 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 GSTA2P09210 222 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 ZNF19P17023 458 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 GPX3P22352 226 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 HNRNPA2B1P22626 353 aaKnown RBP4.1□□□□□ -1.75
SF3B1-212ENST00000496458 OTX2P32243 289 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 UBE2HP62256 183 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 CBX1P83916 185 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 SLC34A1Q06495 639 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 SPP2Q13103 211 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 DDX39BQ13838 428 aaKnown RBP4.1□□□□□ -1.75
SF3B1-212ENST00000496458 CNPY1Q3B7I2 92 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 CFAP221Q4G0U5 840 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 CFAP157Q5JU67 520 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 WDR88Q6ZMY6 472 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 TAS2R42Q7RTR8 314 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 GVQW1Q8N7I0 195 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 EIF1ADQ8N9N8 165 aaKnown RBP4.1□□□□□ -1.75
SF3B1-212ENST00000496458 TMEM185AQ8NFB2 350 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 ULK4Q96C45 1275 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 C16orf58Q96GQ5 468 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 DPEP3Q9H4B8 488 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 GDAP2Q9NXN4 497 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 RCOR3Q9P2K3 495 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-212ENST00000496458 EIF3KQ9UBQ5 218 aaKnown RBP4.1□□□□□ -1.75
SF3B1-212ENST00000496458 Q9UF83 564 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 PSORS1C1Q9UIG5 152 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 KCNK6Q9Y257 313 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 ITM2BQ9Y287 266 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 ANKRD30BQ9BXX2 1392 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 MED14O60244 1454 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 TRPM2O94759 1503 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 IQGAP1P46940 1657 aa4.1□□□□□ -1.75
SF3B1-212ENST00000496458 ZSCAN5BA6NJL1 495 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 RNF212BA8MTL3 300 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 E9PBE3 544 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 TLR4O00206 839 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 HSF2BPO75031 334 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 ERLIN1O75477 346 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 CXCL10P02778 98 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 TPM3P06753 285 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 PGK2P07205 417 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 RHOXF2BP0C7M4 288 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 HSD17B1P14061 328 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 GALP22466 123 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 VCPP55072 806 aaKnown RBP4.09□□□□□ -1.75
SF3B1-212ENST00000496458 EMC2Q15006 297 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 SYCP1Q15431 976 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 KRTAP13-3Q3SY46 172 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 NADK2Q4G0N4 442 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 KCTD21Q4G0X4 260 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 C14orf28Q4W4Y0 310 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 WDR25Q64LD2 544 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-212ENST00000496458 KCTD11Q693B1 232 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 METAP1DQ6UB28 335 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-212ENST00000496458 CES3Q6UWW8 571 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 ARSKQ6UWY0 536 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 C17orf64Q86WR6 236 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 THEM5Q8N1Q8 247 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 BBS5Q8N3I7 341 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 TRPV3Q8NET8 790 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 STEAP2Q8NFT2 490 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 TBCKQ8TEA7 893 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 CYYR1Q96J86 154 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 B3GALT6Q96L58 329 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 RBM14Q96PK6 669 aaKnown RBP4.09□□□□□ -1.75
SF3B1-212ENST00000496458 PANX3Q96QZ0 392 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 CCT7Q99832 543 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 RHOXF2Q9BQY4 288 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 EDEM2Q9BV94 578 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 WWP1Q9H0M0 922 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 ATG10Q9H0Y0 220 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 CARD9Q9H257 536 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 AMBNQ9NP70 447 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 HOMER3Q9NSC5 361 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 MIS18AQ9NYP9 233 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 RNF24Q9Y225 148 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 MRPS7Q9Y2R9 242 aaKnown RBP4.09□□□□□ -1.75
SF3B1-212ENST00000496458 TTC41PQ6P2S7 1318 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 DHX57Q6P158 1386 aaKnown RBP4.09□□□□□ -1.75
SF3B1-212ENST00000496458 PLEKHG1Q9ULL1 1385 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 ZFYVE9O95405 1425 aa4.09□□□□□ -1.75
SF3B1-212ENST00000496458 C15orf38-AP3S2A0A0A6YYH1 394 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 STRCP1A6NGW2 1772 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 H0Y8G0 127 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 BUB1O43683 1085 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 CACNG3O60359 315 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 PAHP00439 452 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 SBK2P0C263 348 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 FASP25445 335 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 PPP2R1BP30154 601 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 SRP54P61011 504 aaKnown RBP4.08□□□□□ -1.76
SF3B1-212ENST00000496458 SARNPP82979 210 aaKnown RBP4.08□□□□□ -1.76
SF3B1-212ENST00000496458 MEF2DQ14814 521 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 CGB2Q6NT52 195 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 Q6ZRG5 221 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 ARL14Q8N4G2 192 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 CHDHQ8NE62 594 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-212ENST00000496458 ZNF671Q8TAW3 534 aa4.08□□□□□ -1.76
SF3B1-212ENST00000496458 GGHQ92820 318 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms