RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ZNF337Q9Y3M9 751 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 C2CD3Q4AC94 2353 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 ABCA4P78363 2273 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 OR2M5A3KFT3 312 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 SHISA8B8ZZ34 492 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 SCAMP2O15127 329 aaKnown RBP12.88□□□□□ -0.35
VTI1A-209ENST00000496445 ANGPTL1O95841 491 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 PEPDP12955 493 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 ETV4P43268 484 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 ASMTP46597 345 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 PRKAG1P54619 331 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 IFFO1Q0D2I5 559 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 PTGR1Q14914 329 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 DAZAP2Q15038 168 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-209ENST00000496445 DUSP5Q16690 384 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 TMEM44Q2T9K0 475 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 MFSD12Q6NUT3 480 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 EMBQ6PCB8 327 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 SZRD1Q7Z422 152 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 CDC20BQ86Y33 519 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 SLC16A11Q8NCK7 471 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 NUDT8Q8WV74 236 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 FIG4Q92562 907 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 SLC9A6Q92581 669 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 NINJ1Q92982 152 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 CAVIN3Q969G5 261 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 MTERF3Q96E29 417 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
VTI1A-209ENST00000496445 OTUB1Q96FW1 271 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-209ENST00000496445 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 C1orf50Q9BV19 199 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 ACBD3Q9H3P7 528 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 EML4Q9HC35 981 aaKnown RBP12.88□□□□□ -0.35
VTI1A-209ENST00000496445 SDHAF3Q9NRP4 125 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 ZDHHC2Q9UIJ5 367 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 ST6GALNAC2Q9UJ37 374 aa12.88□□□□□ -0.35
VTI1A-209ENST00000496445 FLNAP21333 2647 aaKnown RBP12.88□□□□□ -0.35
VTI1A-209ENST00000496445 SLC22A20A6NK97 555 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 ALG1L2C9J202 215 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 H3BML4 177 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 SEC14L5O43304 696 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 EMC8O43402 210 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 TYROBPO43914 113 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 GMFGO60234 142 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 SKAP2O75563 359 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 KCNK2O95069 426 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 OXSR1O95747 527 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 BPGMP07738 259 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 EPXP11678 715 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 SERPINB5P36952 375 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 CLDN20P56880 219 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 VPS26BQ4G0F5 336 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 WDR93Q6P2C0 686 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 FIGNL1Q6PIW4 674 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 MEIOBQ8N635 442 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 OR7A2PQ8NGA2 310 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 CEP70Q8NHQ1 597 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 FAM110BQ8TC76 370 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 STARD4Q96DR4 205 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 ZNF845Q96IR2 970 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 PPP3R2Q96LZ3 170 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 NPAS1Q99742 590 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 KLHDC3Q9BQ90 382 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 TBL1XR1Q9BZK7 514 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 ROPN1BQ9BZX4 212 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 CXXC4Q9H2H0 198 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 PIGMQ9H3S5 423 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 PTGES2Q9H7Z7 377 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 ROPN1Q9HAT0 212 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 CCM2LQ9NUG4 571 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 FBXO34Q9NWN3 711 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 PACSIN3Q9UKS6 424 aa12.87□□□□□ -0.35
VTI1A-209ENST00000496445 V9GYY5 206 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 NUP214P35658 2090 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-209ENST00000496445 A8MXE2 369 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 PEX11AO75192 247 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 SLU7O95391 586 aaKnown RBP12.86□□□□□ -0.35
VTI1A-209ENST00000496445 NGFRP08138 427 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 LAMP1P11279 417 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 CD1EP15812 388 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 CPOXP36551 454 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 HPCAL1P37235 193 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 CPA2P48052 419 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 CLK3P49761 638 aaKnown RBP12.86□□□□□ -0.35
VTI1A-209ENST00000496445 C17orf67Q0P5P2 114 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 MLC1Q15049 377 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 GLYR1Q49A26 553 aaPredicted RBP12.86□□□□□ -0.35
VTI1A-209ENST00000496445 C6orf136Q5SQH8 315 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 VWA1Q6PCB0 445 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 P4HA3Q7Z4N8 544 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 R3HCC1LQ7Z5L2 792 aaKnown RBP12.86□□□□□ -0.35
VTI1A-209ENST00000496445 GGNQ86UU5 652 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 KRTCAP2Q8N6L1 136 aa12.86□□□□□ -0.35
VTI1A-209ENST00000496445 METTL25Q8N6Q8 603 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms