RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, human

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR3-208	ENST00000496050	MRPL39	Q9NYK5	338 aa	Known RBP	4.26	□□□□□ -1.73
SSR3-208	ENST00000496050	CHRNA9	Q9UGM1	479 aa		4.26	□□□□□ -1.73
SSR3-208	ENST00000496050	SMC3	Q9UQE7	1217 aa		4.26	□□□□□ -1.73
SSR3-208	ENST00000496050	ATP10D	Q9P241	1426 aa		4.26	□□□□□ -1.73
SSR3-208	ENST00000496050	ATAD2B	Q9ULI0	1458 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	CCT8L1P	A6NM43	557 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	XPO1	O14980	1071 aa	Known RBP	4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	CTAGE5	O15320	804 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	MAGEB3	O15480	346 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	OR1F1	O43749	312 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	RHOBTB1	O94844	696 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	KIAA0754	O94854	1291 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	VENTX	O95231	258 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	GJB5	O95377	273 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	ADCY5	O95622	1261 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	OPN1LW	P04000	364 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	ALPI	P09923	528 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	RPA2	P15927	270 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	ACVR1B	P36896	505 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	PTGER3	P43115	390 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	OR1D4	P47884	311 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	CNTN2	Q02246	1040 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	SLC10A1	Q14973	349 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	TEX44	Q53QW1	395 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	CFAP157	Q5JU67	520 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	CELF3	Q5SZQ8	465 aa	Known RBP	4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	OR8G2P	Q6IF36	304 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	DPY19L4	Q7Z388	723 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	IPMK	Q8NFU5	416 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	AGAP11	Q8TF27	550 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	SENP8	Q96LD8	212 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	APOL2	Q9BQE5	337 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	TMEM121	Q9BTD3	319 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	POLR1E	Q9GZS1	481 aa	Known RBP	4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	EHF	Q9NZC4	300 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	GSTK1	Q9Y2Q3	226 aa		4.25	□□□□□ -1.73
SSR3-208	ENST00000496050	CACNA1F	O60840	1977 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	ZSCAN5B	A6NJL1	495 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	GPR89A	B7ZAQ6	455 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	SAP18	O00422	153 aa	Known RBP	4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	GPRIN2	O60269	458 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	BCAS1	O75363	584 aa	Predicted RBP	4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	RHBDL1	O75783	438 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	GPR89B	P0CG08	455 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	FOLR2	P14207	255 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	IDS	P22304	550 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	ATP5A1	P25705	553 aa	Known RBP	4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	MAGEA5	P43359	124 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	ALDH3B2	P48448	385 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	FNTA	P49354	379 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	CSTF1	Q05048	431 aa	Known RBP	4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	RGS1	Q08116	209 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	PJVK	Q0ZLH3	352 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	SELPLG	Q14242	412 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	LRRC23	Q53EV4	343 aa	Predicted RBP	4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	RABGAP1L	Q5R372	815 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	TMEM17	Q86X19	198 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	UNC5CL	Q8IV45	518 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	TBC1D21	Q8IYX1	336 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	FBXO30	Q8TB52	745 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	RAET1E	Q8TD07	263 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	VN1R17P	Q8TDU5	208 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	FAM222B	Q8WU58	562 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	RLN3	Q8WXF3	142 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	PPP1R16A	Q96I34	528 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	ALG12	Q9BV10	488 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	TEX13B	Q9BXU2	312 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050	WDR45	Q9Y484	360 aa		4.24	□□□□□ -1.73
SSR3-208	ENST00000496050		A8MX80	341 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	STX7	O15400	261 aa	Known RBP	4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	PHF1	O43189	567 aa	Predicted RBP	4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	TBX6	O95947	436 aa	Predicted RBP	4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	IGF1	P05019	195 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	CT45A10	P0DMU9	189 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	UMPS	P11172	480 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	PDHB	P11177	359 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	LAMP1	P11279	417 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	RPL4	P36578	427 aa	Known RBP	4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	PLA2G16	P53816	162 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	IST1	P53990	364 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	SPIB	Q01892	262 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	CHI3L2	Q15782	390 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	SLC22A6	Q4U2R8	563 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050		Q8N9G6	341 aa	Predicted RBP	4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	CNIH3	Q8TBE1	160 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	NANP	Q8TBE9	248 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	AEN	Q8WTP8	325 aa	Known RBP	4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	OR5M11	Q96RB7	305 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	OMD	Q99983	421 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	ELOVL4	Q9GZR5	314 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	ANAPC7	Q9UJX3	599 aa		4.23	□□□□□ -1.73
SSR3-208	ENST00000496050	COL5A2	P05997	1499 aa	Predicted RBP	4.23	□□□□□ -1.73
SSR3-208	ENST00000496050		A0A087WWV3	80 aa		4.22	□□□□□ -1.73
SSR3-208	ENST00000496050	ZNF840P	A6NDX5	716 aa		4.22	□□□□□ -1.73
SSR3-208	ENST00000496050	OR6C65	A6NJZ3	312 aa		4.22	□□□□□ -1.73
SSR3-208	ENST00000496050	SLC17A2	O00624	439 aa		4.22	□□□□□ -1.73

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