RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TMCO6Q96DC7 493 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SPDL1Q96EA4 605 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 EGLN2Q96KS0 407 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 AMDHD1Q96NU7 426 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 COL21A1Q96P44 957 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 HOPXQ9BPY8 73 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 GLIPR2Q9H4G4 154 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 SPAG4Q9NPE6 437 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 KLRF1Q9NZS2 232 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 TNFRSF10DQ9UBN6 386 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 C19orf53Q9UNZ5 99 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 RNF6Q9Y252 685 aa12.05□□□□□ -0.48
ERCC3-209ENST00000494464 EIF3LQ9Y262 564 aaKnown RBP12.05□□□□□ -0.48
ERCC3-209ENST00000494464 ARHGAP21Q5T5U3 1957 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 CENPEQ02224 2701 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 ITPR2Q14571 2701 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 ANKRD28O15084 1053 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 PDPK1O15530 556 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 ICOSLGO75144 302 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 KRT36O76013 467 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 COX6B1P14854 86 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 ME2P23368 584 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 GCKP35557 465 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 PSG6Q00889 435 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 CRYZQ08257 329 aaKnown RBP12.04□□□□□ -0.48
ERCC3-209ENST00000494464 ZNF155Q12901 538 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-209ENST00000494464 PDE7AQ13946 482 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 EFR3AQ14156 821 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 RCN1Q15293 331 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 RFTN2Q52LD8 501 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-209ENST00000494464 NHSL2Q5HYW2 709 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 C1orf185Q5T7R7 199 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 DESI1Q6ICB0 168 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 ZNF585AQ6P3V2 769 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 TMEM107Q6UX40 140 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 ANGPTL8Q6UXH0 198 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 RETREG3Q86VR2 466 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 OR1J4Q8NGS1 313 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 GNRHR2Q96P88 292 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 CDRT15Q96T59 188 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 GPATCH1Q9BRR8 931 aaKnown RBP12.04□□□□□ -0.48
ERCC3-209ENST00000494464 TTYH2Q9BSA4 534 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 C1orf50Q9BV19 199 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 REEP4Q9H6H4 257 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
ERCC3-209ENST00000494464 GID8Q9NWU2 228 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 STX18Q9P2W9 335 aaKnown RBP12.04□□□□□ -0.48
ERCC3-209ENST00000494464 NKX1-2Q9UD57 310 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-209ENST00000494464 TEX15Q9BXT5 2789 aa12.04□□□□□ -0.48
ERCC3-209ENST00000494464 CACNA1DQ01668 2161 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 FREM3P0C091 2139 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 FAM47E-STBD1D6RA91 191 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 C19orf84I3L1E1 186 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 UPK1AO00322 258 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 GNB5O14775 395 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 REM1O75628 298 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 NPPAP01160 153 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 GLI4P10075 376 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 MAPK1P28482 360 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 IL12BP29460 328 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 KRT20P35900 424 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 FRKP42685 505 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-209ENST00000494464 ASMTP46597 345 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 TRPC1P48995 793 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 POLR2JP52435 117 aaKnown RBP12.03□□□□□ -0.48
ERCC3-209ENST00000494464 PNLIPRP2P54317 469 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 MRPS22P82650 360 aaKnown RBP12.03□□□□□ -0.48
ERCC3-209ENST00000494464 PMPCAQ10713 525 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 CEACAM7Q14002 265 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 CCNIQ14094 377 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 IL23RQ5VWK5 629 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 GDF7Q7Z4P5 450 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 SLC44A2Q8IWA5 706 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-209ENST00000494464 MCEMP1Q8IX19 187 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 GLB1L3Q8NCI6 653 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-209ENST00000494464 LILRB4Q8NHJ6 448 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 CCDC124Q96CT7 223 aaKnown RBP12.03□□□□□ -0.48
ERCC3-209ENST00000494464 MTERF3Q96E29 417 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 ELP4Q96EB1 424 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 TSSK3Q96PN8 268 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 SPOCK3Q9BQ16 436 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 TREX2Q9BQ50 279 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-209ENST00000494464 PRDM14Q9GZV8 571 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 ENKD1Q9H0I2 346 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 GALNT9Q9HCQ5 603 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 TMEM181Q9P2C4 612 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 STOML1Q9UBI4 398 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 ABCD2Q9UBJ2 740 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 LEF1Q9UJU2 399 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-209ENST00000494464 WIF1Q9Y5W5 379 aa12.03□□□□□ -0.48
ERCC3-209ENST00000494464 HCFC1P51610 2035 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 C15orf38-AP3S2A0A0A6YYH1 394 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 CCDC154A6NI56 674 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 TTC36A6NLP5 189 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 FXYD1O00168 92 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 CFLARO15519 480 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 NME6O75414 186 aaPredicted RBP12.02□□□□□ -0.49
ERCC3-209ENST00000494464 TRAPPC6AO75865 159 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 G6PDP11413 515 aa12.02□□□□□ -0.49
ERCC3-209ENST00000494464 PRPS2P11908 318 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms