RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 AMBNQ9NP70 447 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 RAI14Q9P0K7 980 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 BARX2Q9UMQ3 279 aaPredicted RBP4.97□□□□□ -1.61
SMC2-205ENST00000493955 ASB3Q9Y575 518 aa4.97□□□□□ -1.61
SMC2-205ENST00000493955 AQRO60306 1485 aaKnown RBP eCLIP4.97□□□□□ -1.61
SMC2-205ENST00000493955 CLASP1Q7Z460 1538 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 PBRM1Q86U86 1689 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 IGHV3OR16-10A0A075B7F0 116 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 PRR23D1E9PI22 279 aaPredicted RBP4.96□□□□□ -1.62
SMC2-205ENST00000493955 GPRIN2O60269 458 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 SNX4O95219 450 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 PRR23D2P0DMB1 279 aaPredicted RBP4.96□□□□□ -1.62
SMC2-205ENST00000493955 TBXA2RP21731 343 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 ARHGDIAP52565 204 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 PLA2G16P53816 162 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 PLOD1Q02809 727 aaPredicted RBP4.96□□□□□ -1.62
SMC2-205ENST00000493955 C17orf58Q2M2W7 97 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 CNPY1Q3B7I2 92 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 ATF7IP2Q5U623 682 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 TMUB2Q71RG4 321 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 KIAA1328Q86T90 577 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 LRRC49Q8IUZ0 686 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 EIF1ADQ8N9N8 165 aaKnown RBP4.96□□□□□ -1.62
SMC2-205ENST00000493955 SYT14Q8NB59 555 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 RFESDQ8TAC1 157 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 C18orf12Q96KH6 178 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 PSKH2Q96QS6 385 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 IWS1Q96ST2 819 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 EDEM2Q9BV94 578 aa4.96□□□□□ -1.62
SMC2-205ENST00000493955 TDRD15B5MCY1 1934 aaKnown RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 POLA1P09884 1462 aaPredicted RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 A0A1B0GTH9 108 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 TRABD2BA6NFA1 517 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 RPL37AP8A6NKH3 93 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 NUDT21O43809 227 aaKnown RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 SNNO75324 88 aaPredicted RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 IGHG3P01860 377 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 IGF1P05019 195 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 SDC1P18827 310 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 IGFBP5P24593 272 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 ETV5P41161 510 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 PRELPP51888 382 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 CD300CQ08708 224 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 FCHO2Q0JRZ9 810 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 TMEM44Q2T9K0 475 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 SEL1L3Q68CR1 1132 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 FAAP20Q6NZ36 180 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 CYS1Q717R9 158 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 ZSCAN4Q8NAM6 433 aaPredicted RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 FAM3CQ92520 227 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 RPL3LQ92901 407 aaKnown RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 EMG1Q92979 244 aaKnown RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 SECISBP2Q96T21 854 aaKnown RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 RIT2Q99578 217 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 RCOR3Q9P2K3 495 aaPredicted RBP4.95□□□□□ -1.62
SMC2-205ENST00000493955 GNG12Q9UBI6 72 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 CRLS1Q9UJA2 301 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 RNF24Q9Y225 148 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 GMPPBQ9Y5P6 360 aa4.95□□□□□ -1.62
SMC2-205ENST00000493955 ZSCAN5BA6NJL1 495 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 H7C423 109 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 EFNA2O43921 213 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 B3GAT3O94766 335 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 PVRP15151 417 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 TPSB2P20231 275 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 PBLDP30039 288 aaPredicted RBP4.94□□□□□ -1.62
SMC2-205ENST00000493955 RPL4P36578 427 aaKnown RBP4.94□□□□□ -1.62
SMC2-205ENST00000493955 EWSR1Q01844 656 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMC2-205ENST00000493955 BDH1Q02338 343 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 CSTF1Q05048 431 aaKnown RBP4.94□□□□□ -1.62
SMC2-205ENST00000493955 TPSAB1Q15661 275 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 SYPL1Q16563 259 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 DOK6Q6PKX4 331 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 ERICH1Q86X53 443 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 LRRC43Q8N309 656 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 OR4Q3Q8NH05 313 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 M1APQ8TC57 530 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 APMAPQ9HDC9 416 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 SLCO1B1Q9Y6L6 691 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 METP08581 1390 aa4.94□□□□□ -1.62
SMC2-205ENST00000493955 SNAPC4Q5SXM2 1469 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 TPST2O60704 377 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 RNF224P0DH78 156 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 ZNF44P15621 663 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 CALB2P22676 271 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 NOVA1P51513 510 aaKnown RBP4.93□□□□□ -1.62
SMC2-205ENST00000493955 RGS1Q08116 209 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 ZNF506Q5JVG8 444 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 DCST2Q5T1A1 773 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 LGSNQ5TDP6 509 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 TMEM225Q6GV28 225 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 CLDN19Q8N6F1 224 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 CNIH3Q8TBE1 160 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 SLC41A3Q96GZ6 507 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 C9orf85Q96MD7 179 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 NAP1L5Q96NT1 182 aaPredicted RBP4.93□□□□□ -1.62
SMC2-205ENST00000493955 ZBTB18Q99592 522 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 HEXA-AS1Q9H8Q6 139 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 PANK3Q9H999 370 aa4.93□□□□□ -1.62
SMC2-205ENST00000493955 MEPEQ9NQ76 525 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms