RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 ITGAMP11215 1152 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 TDGF1P3P51864 188 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 MAP4K2Q12851 820 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF155Q12901 538 aaPredicted RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 EXT1Q16394 746 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 SP5Q6BEB4 398 aaPredicted RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 PLAG1Q6DJT9 500 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 MTFR2Q6P444 385 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 GFRALQ6UXV0 394 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 DGAT2L6Q6ZPD8 337 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 OR7G2Q8NG99 324 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 OR52R1Q8NGF1 315 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 FBXO27Q8NI29 283 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 PSMA8Q8TAA3 256 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 SLC2A12Q8TD20 617 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 GATAD2BQ8WXI9 593 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 JADE3Q92613 823 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 RELTQ969Z4 430 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 FAM120BQ96EK7 910 aaKnown RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF354BQ96LW1 612 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 ANKRD27Q96NW4 1050 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 MS4A4EQ96PG1 132 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 THUMPD3Q9BV44 507 aaKnown RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 WNT10AQ9GZT5 417 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 TPT1P8Q9HAU6 139 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 SPAG4Q9NPE6 437 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 SLC6A13Q9NSD5 602 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 PLA2G3Q9NZ20 509 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 ADA2Q9NZK5 511 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 SUCOQ9UBS9 1254 aaKnown RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 CORO2BQ9UQ03 480 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 PCDHGB6Q9Y5F9 930 aa11.2□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF469Q96JG9 3925 aaPredicted RBP11.2□□□□□ -0.62
UPF3A-210ENST00000493727 A0A087WV62 115 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 PRAMEF27A3QJZ7 478 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 PRSS44E7EML9 344 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 FXYD1O00168 92 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 CLIC1O00299 241 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 PLOD3O60568 738 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 PRAMEF2O60811 474 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 IFI6P09912 130 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 SSTR4P31391 388 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 CRATP43155 626 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 PRIM2P49643 509 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 KHKP50053 298 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 ANXA11P50995 505 aaKnown RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 SLC7A2P52569 658 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 MTPNP58546 118 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 NCALDP61601 193 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 RBPJQ06330 500 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 CDK5R2Q13319 367 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 LASP1Q14847 261 aaKnown RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 EXOSC7Q15024 291 aaKnown RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 BTBD16Q32M84 506 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 TRMT12Q53H54 448 aaKnown RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 RUNDC3AQ59EK9 446 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 SAXO2Q658L1 398 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 RNF111Q6ZNA4 994 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 C6orf120Q7Z4R8 191 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 YTHDF3Q7Z739 585 aaKnown RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 FJX1Q86VR8 437 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 MSRB3Q8IXL7 192 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 MORN4Q8NDC4 146 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 OR7G1Q8NGA0 311 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 OR8J3Q8NGG0 315 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 ZFP90Q8TF47 636 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 PTPMT1Q8WUK0 201 aaPredicted RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 MCUR1Q96AQ8 359 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 NEURL3Q96EH8 262 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 SENP5Q96HI0 755 aaPredicted RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 FBXL20Q96IG2 436 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 TAAR6Q96RI8 345 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 CPPED1Q9BRF8 314 aaPredicted RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 BTBD10Q9BSF8 475 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 TRIM8Q9BZR9 551 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 C1orf21Q9H246 121 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 ANKRA2Q9H9E1 313 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 TAS2R1Q9NYW7 299 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 SLC25A37Q9NYZ2 338 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 STMN3Q9NZ72 180 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 PRODH2Q9UF12 536 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 FAF1Q9UNN5 650 aaPredicted RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 AP3M1Q9Y2T2 418 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.19□□□□□ -0.62
UPF3A-210ENST00000493727 NAV3Q8IVL0 2385 aa11.19□□□□□ -0.62
UPF3A-210ENST00000493727 TRBV5-3A0A0A0MS03 114 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 HRKO00198 91 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 UPK1AO00322 258 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 CBX7O95931 251 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 MATN1P21941 496 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 PTPN6P29350 595 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 CPOXP36551 454 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 CASP9P55211 416 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 CASP6P55212 293 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 MGAT2Q10469 447 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 SELPLGQ14242 412 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 ZNHIT3Q15649 155 aaPredicted RBP11.18□□□□□ -0.62
UPF3A-210ENST00000493727 MEP1AQ16819 746 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 CYP51A1Q16850 503 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms