RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 HACD4Q5VWC8 232 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 TMUB2Q71RG4 321 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 SLITRK4Q8IW52 837 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 CPXM2Q8N436 756 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 MEIOBQ8N635 442 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 KCTD12Q96CX2 325 aaKnown RBP10.96□□□□□ -0.66
HDAC4-210ENST00000493582 ECHDC3Q96DC8 303 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 CXorf40BQ96DE9 158 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 MIEF1Q9NQG6 463 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 TDP1Q9NUW8 608 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 C5AR2Q9P296 337 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 RCE1Q9Y256 329 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 KIAA1671Q9BY89 1806 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 ZC3H12DA2A288 527 aaKnown RBP10.96□□□□□ -0.66
HDAC4-210ENST00000493582 TMEM202A6NGA9 273 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 LINC00587B1AMM8 73 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 LRRN3E7EW58 273 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 E9PI62 339 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 SOCS6O14544 535 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 GALR3O60755 368 aaPredicted RBP10.96□□□□□ -0.66
HDAC4-210ENST00000493582 UBXN7O94888 489 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 SLC16A8O95907 504 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 EGFP01133 1207 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 IGF2P01344 180 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 PTNP21246 168 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 UQCRC2P22695 453 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 CD52P31358 61 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 TRIM23P36406 574 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 PDE7AQ13946 482 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 LRRC73Q5JTD7 316 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 ENTPD8Q5MY95 495 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 SLC22A10Q63ZE4 541 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 KIAA1211LQ6NV74 962 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 FAAP20Q6NZ36 180 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 LRRTM4Q86VH4 590 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 CMIPQ8IY22 773 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 KCT2Q8NC54 265 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 WBP2Q969T9 261 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 TREX2Q9BQ50 279 aaPredicted RBP10.96□□□□□ -0.66
HDAC4-210ENST00000493582 ABCG4Q9H172 646 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 LRRN3Q9H3W5 708 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 BRD9Q9H8M2 597 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 KCNK12Q9HB15 430 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 TAAR2Q9P1P5 351 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 PURGQ9UJV8 347 aaKnown RBP10.96□□□□□ -0.66
HDAC4-210ENST00000493582 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 A0A087WUU8 490 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 B4GALT2O60909 372 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 ADAM11O75078 769 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 TGM6O95932 706 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 PSMB1P20618 241 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 CCR8P51685 355 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 SEC61A1P61619 476 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 ACSM1Q08AH1 577 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 PLD1Q13393 1074 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 NDUFA9Q16795 377 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 AADACL4Q5VUY2 407 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 FAM71E1Q6IPT2 247 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF613Q6PF04 617 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 SZRD1Q7Z422 152 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 NARS2Q96I59 477 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 FAM46AQ96IP4 442 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 NKX6-2Q9C056 277 aaPredicted RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 MTG2Q9H4K7 406 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 BABAM2Q9NXR7 383 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 PPP2R3BQ9Y5P8 575 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 FXYD6-FXYD2A0A087WZ82 144 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 HMGN4O00479 90 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 BNIP3LO60238 219 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 GNSP15586 552 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 ANXA7P20073 488 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 CORO1AP31146 461 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 ATP5C1P36542 298 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 DHODHQ02127 395 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 FGL1Q08830 312 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 IKBIPQ70UQ0 350 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 MRPL10Q7Z7H8 261 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 BOLLQ8N9W6 283 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 OR52N1Q8NH53 320 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 OR1F2PQ96R84 312 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 FXYD6Q9H0Q3 95 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 SLC6A20Q9NP91 592 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 EXOSC3Q9NQT5 275 aaKnown RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 MARK1Q9P0L2 795 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 STOX2Q9P2F5 926 aaPredicted RBP10.95□□□□□ -0.66
HDAC4-210ENST00000493582 SLC6A5Q9Y345 797 aa10.95□□□□□ -0.66
HDAC4-210ENST00000493582 TRAV20A0A0B4J274 112 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 PRAMEF27A3QJZ7 478 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR6C65A6NJZ3 312 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR2AG2A6NM03 316 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 HMGN1P05114 100 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 ACVR1BP36896 505 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 FNTBP49356 437 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 MEOX2P50222 304 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 RNF144AP50876 292 aaPredicted RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 MC2RQ01718 297 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 HSPB3Q12988 150 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 SERTAD2Q14140 314 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 METTL11BQ5VVY1 283 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 MED27Q6P2C8 311 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms