RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 AQP8O94778 261 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 RCBTB2O95199 551 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 PAPSS2O95340 614 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CPNE6O95741 557 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 MT-CYBP00156 380 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 IFNA4P05014 189 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CDK1P06493 297 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CHRM4P08173 479 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ADRB1P08588 477 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 PET100P0DJ07 73 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SPP1P10451 314 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 NR2F6P10588 404 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ANXA3P12429 323 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 DAOP14920 347 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 HLA-GP17693 338 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OGNP20774 298 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CD82P27701 267 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ACADLP28330 430 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ACOT2P49753 483 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CCR6P51684 374 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 DGKQP52824 942 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CRYBA4P53673 196 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 RPL15P61313 204 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 VLDLRP98155 873 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OGDHQ02218 1023 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CKAP4Q07065 602 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SPEM2Q0P670 501 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 MESP2Q0VG99 397 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 KRR1Q13601 381 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 PKP1Q13835 747 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 COL9A3Q14050 684 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 R3HDM1Q15032 1099 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OR4D1Q15615 310 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 KIF19Q2TAC6 998 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CNPY1Q3B7I2 92 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SLC36A2Q495M3 483 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ARMCX4Q5H9R4 360 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 FAM182BQ5T319 152 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OR2G6Q5TZ20 316 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 TRIQKQ629K1 86 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 RNF43Q68DV7 783 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM225Q6GV28 225 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 NIPAL1Q6NVV3 410 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SH2D5Q6ZV89 423 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SEM1Q6ZVN7 128 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 TTLL10Q6ZVT0 673 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CYB5R4Q7L1T6 521 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 FCRLAQ7L513 359 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ADGRE4PQ86SQ3 457 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 MFSD6LQ8IWD5 586 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ADGRF3Q8IZF5 1079 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 PELI3Q8N2H9 469 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 C2CD4AQ8NCU7 369 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OR51D1Q8NGF3 324 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OR10W1Q8NGF6 305 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OR9A4Q8NGU2 314 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 STOML3Q8TAV4 291 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 PIGXQ8TBF5 258 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 MRAPQ8TCY5 172 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 AGAP11Q8TF27 550 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 C16orf78Q8WTQ4 265 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 NAT6Q93015 286 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 FAM131CQ96AQ9 280 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 C18orf25Q96B23 403 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 TESCQ96BS2 214 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 ZG16BQ96DA0 208 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 KLHDC7BQ96G42 594 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 CELF6Q96J87 481 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 RNF170Q96K19 258 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 FOPNLQ96NB1 174 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OR2V2Q96R30 315 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 PAAF1Q9BRP4 392 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 TIMM29Q9BSF4 260 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 DUSP16Q9BY84 665 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 WWTR1Q9GZV5 400 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SIK2Q9H0K1 926 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 C10orf88Q9H8K7 445 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 RHOFQ9HBH0 211 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OLFML3Q9NRN5 406 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 C1GALT1Q9NS00 363 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 SPATA6Q9NWH7 488 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 BABAM2Q9NXR7 383 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 PIPOXQ9P0Z9 390 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 KLQ9UEF7 1012 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 OR52A1Q9UKL2 312 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 RNF150Q9ULK6 438 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 MRPS18CQ9Y3D5 142 aaKnown RBP3.91□□□□□ -1.78
BRCA1-220ENST00000492859 TCAF1Q9Y4C2 921 aa3.91□□□□□ -1.78
BRCA1-220ENST00000492859 JCADQ9P266 1359 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 TAF1P21675 1872 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 SPATA31A6Q5VVP1 1343 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 PPIAL4EA0A075B759 164 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 A0A087X0K7 114 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM129A0AVI4 362 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 GXYLT2A0PJZ3 443 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 FAM92AA1XBS5 289 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 CPED1A4D0V7 1026 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 PP2D1A8MPX8 630 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 M0QYV0 167 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms