RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ATAD3BQ5T9A4 648 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 OR5M10Q6IEU7 315 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 BLOC1S3Q6QNY0 202 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 APOOLQ6UXV4 268 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 C16orf62Q7Z3J2 963 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 RNF130Q86XS8 419 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 CHDHQ8NE62 594 aaPredicted RBP14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 FAM83FQ8NEG4 500 aaPredicted RBP14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 OR4C3Q8NH37 302 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SSC4DQ8WTU2 575 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SARAFQ96BY9 339 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SPDL1Q96EA4 605 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 RTN4RQ9BZR6 473 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZNF385DQ9H6B1 395 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 UBQLN4Q9NRR5 601 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SPRR3Q9UBC9 169 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 FBXL2Q9UKC9 423 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 TENM4Q6N022 2769 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 RELNP78509 3460 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZGRF1Q86YA3 2104 aa14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PRRC2CQ9Y520 2896 aaKnown RBP14.83□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 NUP214P35658 2090 aaPredicted RBP14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 CCL21O00585 134 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 BCKDKO14874 412 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZIC2O95409 532 aaPredicted RBP14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 KRT75O95678 551 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 C1QCP02747 245 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SRD5A2P31213 254 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DCTP40126 519 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ANXA11P50995 505 aaKnown RBP14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ARFIP2P53365 341 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 TXNL4AP83876 142 aaKnown RBP14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 C17orf67Q0P5P2 114 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ARHGAP11BQ3KRB8 267 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 FLYWCH1Q4VC44 716 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 EIPR1Q53HC9 387 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 WIPI1Q5MNZ9 446 aaPredicted RBP14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 METTL21CQ5VZV1 264 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SLC2A7Q6PXP3 512 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DOLPP1Q86YN1 238 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 FADS6Q8N9I5 356 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZNF527Q8NB42 609 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 OR2M3Q8NG83 312 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZFP90Q8TF47 636 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 XAGE5Q8WWM1 108 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GTF2H4Q92759 462 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PHF12Q96QT6 1004 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SDF2Q99470 211 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 OR2B2Q9GZK3 357 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 HOXD1Q9GZZ0 328 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DSN1Q9H410 356 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 HHATLQ9HCP6 504 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SLC6A13Q9NSD5 602 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SUCOQ9UBS9 1254 aaKnown RBP14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DKKL1Q9UK85 242 aa14.82□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 IGLV3-32A0A0A0MS00 114 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 C15orf38-AP3S2A0A0A6YYH1 394 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 NPIPA5A0A0B4J1W7 369 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 A0A1W2PQD3 144 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 B4DXG7 233 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 NPIPA7E9PJI5 369 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 NDUFB5O43674 189 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 LDLRP01130 860 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 NPIPA8P0DM63 369 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ESRRAP11474 423 aaPredicted RBP14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 CAPN3P20807 821 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SF3A3Q12874 501 aaKnown RBP eCLIP14.81□□□□□ -0.043e-13■■■■□ 21.7
MSH5-SAPCD1-206ENST00000491552 GTDC1Q4AE62 458 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 WLSQ5T9L3 541 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 HEPHL1Q6MZM0 1159 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MTFR2Q6P444 385 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 YRDCQ86U90 279 aaKnown RBP14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MISPQ8IVT2 679 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 EID3Q8N140 333 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GATSQ8NAP1 163 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 OR14L1PQ8NHC6 308 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PNPT1Q8TCS8 783 aaKnown RBP14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DUSP19Q8WTR2 217 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 RAB8BQ92930 207 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ZNF317Q96PQ6 595 aaPredicted RBP14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 PAIP1Q9H074 479 aaKnown RBP14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SLC52A3Q9NQ40 469 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MED11Q9P086 117 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 TNFRSF10DQ9UBN6 386 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ACAD8Q9UKU7 415 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 SLC6A5Q9Y345 797 aa14.81□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 A0A096LPI6 279 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 HMGN4O00479 90 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 STX11O75558 287 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 RNF224P0DH78 156 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DPP4P27487 766 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GCKP35557 465 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 MAGEA8P43361 318 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 ATP12AP54707 1039 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 DSCR4P56555 118 aaPredicted RBP14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 FUT5Q11128 374 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GANABQ14697 944 aaKnown RBP14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 GXYLT1Q4G148 440 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 NHSL2Q5HYW2 709 aa14.8□□□□□ -0.04
MSH5-SAPCD1-206ENST00000491552 COX20Q5RI15 118 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms