RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SELENBP1Q13228 472 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 REEP3Q6NUK4 255 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 SLC38A9Q8NBW4 561 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 OR5T3Q8NGG3 340 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 OR9A4Q8NGU2 314 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 KCND3Q9UK17 655 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 CLCA2Q9UQC9 943 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 CFL2Q9Y281 166 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 ZNF749O43361 778 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 KIAA0513O60268 411 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 RECKO95980 971 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 ETV5P41161 510 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 ACY1Q03154 408 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 FOXD4Q12950 439 aaPredicted RBP21.2■□□□□ 0.98
USF3-203ENST00000491165 TSTQ16762 297 aaKnown RBP21.2■□□□□ 0.98
USF3-203ENST00000491165 PLAG1Q6DJT9 500 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 PWWP2BQ6NUJ5 590 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 C19orf48Q6RUI8 117 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 NUDT13Q86X67 352 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 SNX8Q9Y5X2 465 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 SLC22A7Q9Y694 548 aa21.2■□□□□ 0.98
USF3-203ENST00000491165 A0A0A6YYC8 382 aaPredicted RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 PNMA8CA0A1B0GUJ8 204 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 I3L1I5 382 aaPredicted RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 SGK494L7N484 410 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 CCRL2O00421 344 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 KRR1Q13601 381 aaKnown RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 DUSP7Q16829 419 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 ZNF770Q6IQ21 691 aaPredicted RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 ABHD13Q7L211 337 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 NLGN4XQ8N0W4 816 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 CYP4Z2PQ8N1L4 340 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 WDR36Q8NI36 951 aaKnown RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 UCN3Q969E3 161 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 QPCTLQ9NXS2 382 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 AHSPQ9NZD4 102 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 SERTAD3Q9UJW9 196 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 CDV3Q9UKY7 258 aaKnown RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 MKLN1Q9UL63 735 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 HTR3EA5X5Y0 456 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 SNPHO15079 494 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 GALR3O60755 368 aaPredicted RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 KCNK2O95069 426 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 ATXN8OSP0DMR3 200 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 PIPP12273 146 aaPredicted RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 POU1F1P28069 291 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 ETV6P41212 452 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 GRM7Q14831 915 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 RSPO4Q2I0M5 234 aaPredicted RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 SPANXN2Q5MJ10 180 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 CEACAM20Q6UY09 585 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 TTLL10Q6ZVT0 673 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 CXorf36Q9H7Y0 433 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 TEX10Q9NXF1 929 aaPredicted RBP21.19■□□□□ 0.98
USF3-203ENST00000491165 PCDHGB6Q9Y5F9 930 aa21.19■□□□□ 0.98
USF3-203ENST00000491165 URADA6NGE7 173 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 C5orf58C9J3I9 102 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 PRKRAO75569 313 aaKnown RBP21.18■□□□□ 0.98
USF3-203ENST00000491165 ADRA2AP08913 450 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 ALDH9A1P49189 494 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.18■□□□□ 0.98
USF3-203ENST00000491165 RUNX2Q13950 521 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 PUM1Q14671 1186 aaKnown RBP eCLIP21.18■□□□□ 0.98
USF3-203ENST00000491165 AKAP14Q86UN6 197 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 ATCAYQ86WG3 371 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 GPR135Q8IZ08 494 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 SCAIQ8N9R8 606 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 EFHD2Q96C19 240 aaPredicted RBP21.18■□□□□ 0.98
USF3-203ENST00000491165 CMKLR1Q99788 373 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 CUTCQ9NTM9 273 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 RARRES3Q9UL19 164 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 LOXL2Q9Y4K0 774 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 SPTBN2O15020 2390 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 DSPPQ9NZW4 1301 aa21.18■□□□□ 0.98
USF3-203ENST00000491165 ADAP00813 363 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 SLC15A1P46059 708 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 SLAMF1Q13291 335 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 MRM1Q6IN84 353 aaKnown RBP21.17■□□□□ 0.98
USF3-203ENST00000491165 SRFBP1Q8NEF9 429 aaKnown RBP21.17■□□□□ 0.98
USF3-203ENST00000491165 PIEZO1Q92508 2521 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 WASHC1A8K0Z3 465 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 FFAR1O14842 300 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 RDH16O75452 317 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 SNX4O95219 450 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 SPNP16150 400 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 MAPK12P53778 367 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 LIM2P55344 173 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 FAM53BQ14153 422 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 KCNJ8Q15842 424 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 RPS26P11Q5JNZ5 115 aaPredicted RBP21.17■□□□□ 0.98
USF3-203ENST00000491165 ATAD3BQ5T9A4 648 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 RAB11FIP2Q7L804 512 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.17■□□□□ 0.98
USF3-203ENST00000491165 APOBEC4Q8WW27 367 aaKnown RBP21.17■□□□□ 0.98
USF3-203ENST00000491165 TM4SF18Q96CE8 201 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 NUAK2Q9H093 628 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 DLL3Q9NYJ7 618 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 ADAM29Q9UKF5 820 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 TMCC3Q9ULS5 477 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 ATG4BQ9Y4P1 393 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms