RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	SPIN4	Q56A73	249 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	ACSM2B	Q68CK6	577 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	ZDHHC24	Q6UX98	284 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	WDR75	Q8IWA0	830 aa	Known RBP	13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	SPATA4	Q8NEY3	305 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	ADGRG7	Q96K78	797 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	BBS4	Q96RK4	519 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	MRPL57	Q9BQC6	102 aa	Known RBP	13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	TBL1XR1	Q9BZK7	514 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	LRTM1	Q9HBL6	345 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839		Q9N2J8	555 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	NGB	Q9NPG2	151 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	ZNF225	Q9UK10	706 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	SNX8	Q9Y5X2	465 aa		13.63	□□□□□ -0.23
AGAP3-222	ENST00000490839	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	2e-11	■■■■■ 40.8
AGAP3-222	ENST00000490839		A0A087WZY1	265 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	CLOCK	O15516	846 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	OR4F21	O95013	312 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	PSMG1	O95456	288 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	ANGPTL1	O95841	491 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	C8B	P07358	591 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	CD3E	P07766	207 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	THBS1	P07996	1170 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	TSPAN8	P19075	237 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	AGTR1	P30556	359 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	TIA1	P31483	386 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	ACVR1B	P36896	505 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	CDKN1A	P38936	164 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	GSTM5	P46439	218 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	PRR5	P85299	388 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	RASA2	Q15283	850 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	NCMAP	Q5T1S8	102 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	FAM219B	Q5XKK7	198 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	ALKBH2	Q6NS38	261 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	DNM1P46	Q6ZS02	220 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	GALNT10	Q86SR1	603 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	EXOC3L1	Q86VI1	746 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	CDYL2	Q8N8U2	506 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	C16orf78	Q8WTQ4	265 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	SMAP2	Q8WU79	429 aa	Predicted RBP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	S100PBP	Q96BU1	408 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	HDHD5	Q9BXW7	423 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	ACPT	Q9BZG2	426 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	RAB17	Q9H0T7	212 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	MRPL46	Q9H2W6	279 aa	Known RBP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	ESRP2	Q9H6T0	727 aa	Known RBP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	BARX1	Q9HBU1	254 aa	Predicted RBP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	HHATL	Q9HCP6	504 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	DDX18	Q9NVP1	670 aa	Known RBP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	LIPT1	Q9Y234	373 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	VDAC3	Q9Y277	283 aa		13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.62	□□□□□ -0.23
AGAP3-222	ENST00000490839	C7orf72	A4D263	438 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839		A8MT66	165 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839		A8MV72	311 aa	Predicted RBP	13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	MYO1G	B0I1T2	1018 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	ADAMDEC1	O15204	470 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	PHF1	O43189	567 aa	Predicted RBP	13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	CXCL13	O43927	109 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	UTS2	O95399	124 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	IGHV4-39	P01824	125 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	COL6A2	P12110	1019 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	CHN1	P15882	459 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	DDC	P20711	480 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	PHB	P35232	272 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	RFX3	P48380	749 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	NCBP2	P52298	156 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	ZNF672	Q499Z4	452 aa	Predicted RBP	13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	GALNT18	Q6P9A2	607 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	TMEM107	Q6UX40	140 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	OR2L13	Q8N349	312 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	OR2V1	Q8NHB1	315 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	LMF2	Q9BU23	707 aa	Known RBP	13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	KCNF1	Q9H3M0	494 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	ACSS3	Q9H6R3	686 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	C12orf49	Q9H741	205 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	C3orf14	Q9HBI5	128 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	DMGDH	Q9UI17	866 aa	Known RBP	13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839	PLCE1	Q9P212	2302 aa		13.61	□□□□□ -0.23
AGAP3-222	ENST00000490839		A0A1W2PP18	115 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	UPK1A	O00322	258 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	GMFG	O60234	142 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	ULK1	O75385	1050 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	GCM2	O75603	506 aa	Predicted RBP	13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	JUN	P05412	331 aa	Known RBP	13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	FES	P07332	822 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	FAM157C	P0CG43	387 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	IL32	P24001	234 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	HSD17B3	P37058	310 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	RAC1	P63000	192 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	ANK2	Q01484	3957 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	CLC	Q05315	142 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	C2orf54	Q08AI8	447 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	FREM1	Q5H8C1	2179 aa		13.6	□□□□□ -0.23
AGAP3-222	ENST00000490839	GTF2IRD2B	Q6EKJ0	949 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms