RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 AQP12AQ8IXF9 295 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 ZNF595Q8IYB9 648 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 ST6GALNAC3Q8NDV1 305 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 FAR1Q8WVX9 515 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 HAS2Q92819 552 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 KAT2AQ92830 837 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 TBC1D20Q96BZ9 403 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 ELP4Q96EB1 424 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 DUS3LQ96G46 650 aaKnown RBP7□□□□□ -1.29
CLDN1-202ENST00000490800 SPATA9Q9BWV2 254 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 RAD21L1Q9H4I0 556 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 SERHL2Q9H4I8 314 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 DCLRE1BQ9H816 532 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 GORASP2Q9H8Y8 452 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 LANCL2Q9NS86 450 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 C14orf105Q9NVL8 296 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 STMN3Q9NZ72 180 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 MAGEL2Q9UJ55 1249 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 OSGIN2Q9Y236 505 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 CLDN16Q9Y5I7 305 aa7□□□□□ -1.29
CLDN1-202ENST00000490800 ICE1Q9Y2F5 2266 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 LOC102723996A0A087X1L8 192 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 IGHV3-20A0A0C4DH32 117 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 A0A1W2PQ72 361 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 PLOD2O00469 737 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 EMC8O43402 210 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 WDPCPO95876 746 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ATP1B1P05026 303 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 FHP07954 510 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 SLC35E2P0CK97 266 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ITGAMP11215 1152 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ICAM2P13598 275 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 PPP2R1BP30154 601 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 PCGF2P35227 344 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 CRATP43155 626 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 XCR1P46094 333 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 TNFSF10P50591 281 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 AP2B1P63010 937 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 BTG2P78543 158 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 IGLV3-21P80748 117 aaPredicted RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 MGAT2Q10469 447 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 TP53BP2Q13625 1128 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 SNCBQ16143 134 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 MINDY4Q4G0A6 757 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ZNF628Q5EBL2 1059 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 MFSD4BQ5TF39 518 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 RPUSD3Q6P087 351 aaKnown RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ZFP1Q6P2D0 407 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 TNFAIP8L2Q6P589 184 aaPredicted RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ANGPTL8Q6UXH0 198 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 RNF111Q6ZNA4 994 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 MAMDC2Q7Z304 686 aaPredicted RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ADGRG5Q8IZF4 528 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ARMC10Q8N2F6 343 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 HORMAD2Q8N7B1 307 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 CELF2-AS1Q8N7Q2 184 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ADCY4Q8NFM4 1077 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 OR7G2Q8NG99 324 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 OR56A1Q8NGH5 318 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 OR52E4Q8NGH9 312 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 DOK4Q8TEW6 326 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 METTL21AQ8WXB1 218 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 FIG4Q92562 907 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 MAL2Q969L2 176 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 SLCO4A1Q96BD0 722 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 MOAP1Q96BY2 351 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 RSRC1Q96IZ7 334 aaKnown RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 MAGED4Q96JG8 741 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 SLC35G5Q96KT7 338 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 IMMP1LQ96LU5 166 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 LRGUKQ96M69 825 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 NSMCE2Q96MF7 247 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 TAAR6Q96RI8 345 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ZNF700Q9H0M5 742 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 TMEM38AQ9H6F2 299 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 PRTFDC1Q9NRG1 225 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 ZCCHC3Q9NUD5 404 aaKnown RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 NTMQ9P121 344 aa6.99□□□□□ -1.29
CLDN1-202ENST00000490800 STX18Q9P2W9 335 aaKnown RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 MRPS33Q9Y291 106 aaKnown RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 SPTAN1Q13813 2472 aaKnown RBP6.99□□□□□ -1.29
CLDN1-202ENST00000490800 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 A0A087WV62 115 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 TRAV17A0A0B4J275 112 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 DHRS12A0PJE2 317 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 UPK1AO00322 258 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 CLDN4O14493 209 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 PCDH17O14917 1159 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 GMNNO75496 209 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 CDC123O75794 336 aaPredicted RBP6.98□□□□□ -1.29
CLDN1-202ENST00000490800 SEC24DO94855 1032 aaPredicted RBP6.98□□□□□ -1.29
CLDN1-202ENST00000490800 IFI6P09912 130 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 CT62P0C5K7 136 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 ANPEPP15144 967 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 MAOAP21397 527 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 NT5EP21589 574 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 SLC7A1P30825 629 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 MAGEA8P43361 318 aa6.98□□□□□ -1.29
CLDN1-202ENST00000490800 PRKAG1P54619 331 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms