RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FEM1AQ9BSK4 669 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 TMEM121Q9BTD3 319 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 DPH7Q9BTV6 452 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 SLITRK2Q9H156 845 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 GLT8D2Q9H1C3 349 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 POLE3Q9NRF9 147 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 AGPAT5Q9NUQ2 364 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 RBM28Q9NW13 759 aaKnown RBP2.89□□□□□ -1.95
CD46-216ENST00000490278 VNN3Q9NY84 501 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 RDH8Q9NYR8 311 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 AURKCQ9UQB9 309 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 U3KQV3 271 aa2.89□□□□□ -1.95
CD46-216ENST00000490278 A0A087WZY1 265 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 KLF18A0A0U1RQI7 1052 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 A0A1B0GUL7 405 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 RGSL1A5PLK6 1076 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 C19orf81C9J6K1 198 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 CLDN3O15551 220 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 TRIM3O75382 744 aaPredicted RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 STX11O75558 287 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 OR4F21O95013 312 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 ANP32DO95626 131 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 XRCC1P18887 633 aaPredicted RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 CYP2F1P24903 491 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 KIF5BP33176 963 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 GNPDA1P46926 289 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 NOVP48745 357 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 NOVA1P51513 510 aaKnown RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 RND3P61587 244 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 KCNJ11Q14654 390 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 KIAA0040Q15053 153 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 RNF212Q495C1 297 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 TTC31Q49AM3 519 aaPredicted RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 TEX44Q53QW1 395 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 RSBN1Q5VWQ0 802 aaPredicted RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 UFSP1Q6NVU6 142 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 CYS1Q717R9 158 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 CENPUQ71F23 418 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 APOBEC3FQ8IUX4 373 aaKnown RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 ZSCAN4Q8NAM6 433 aaPredicted RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 OR13F1Q8NGS4 319 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 TAF4BQ92750 862 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 C18orf25Q96B23 403 aaPredicted RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 FAF2Q96CS3 445 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 DHTKD1Q96HY7 919 aaPredicted RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 VPS39Q96JC1 886 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 TSSK1BQ9BXA7 367 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 POLR3FQ9H1D9 316 aaPredicted RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 COG4Q9H9E3 785 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 PNO1Q9NRX1 252 aaKnown RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 HPF1Q9NWY4 346 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 UTP6Q9NYH9 597 aaKnown RBP2.88□□□□□ -1.95
CD46-216ENST00000490278 CLEC4EQ9ULY5 219 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 CHMP2BQ9UQN3 213 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 L3MBTL1Q9Y468 752 aa2.88□□□□□ -1.95
CD46-216ENST00000490278 CARMIL1Q5VZK9 1371 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 SAGE2PA6NJ88 616 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 FAM74A7A6NL05 159 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 E9PLD3 99 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 SDHDO14521 159 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 TNFSF11O14788 317 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 JAK2O60674 1132 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 DIRAS3O95661 229 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 PGK1P00558 417 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 AK1P00568 194 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 CD55P08174 381 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 TRPC1P48995 793 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 RPL32P62910 135 aaKnown RBP2.87□□□□□ -1.95
CD46-216ENST00000490278 RPL8P62917 257 aaKnown RBP2.87□□□□□ -1.95
CD46-216ENST00000490278 NTHL1P78549 312 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 BDH1Q02338 343 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 ZNF154Q13106 437 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 LINC01620Q4KN68 170 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 FAM74A3Q4VXF1 159 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 HSP90AA5PQ58FG0 334 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 PAGE2BQ5JRK9 111 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 FHL5Q5TD97 284 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 ZNF658Q5TYW1 1059 aaPredicted RBP2.87□□□□□ -1.95
CD46-216ENST00000490278 OR8G2PQ6IF36 304 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 SDSLQ96GA7 329 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 CNOT6LQ96LI5 555 aaKnown RBP2.87□□□□□ -1.95
CD46-216ENST00000490278 KIR2DL4Q99706 377 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 SLC30A2Q9BRI3 323 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 MRPL13Q9BYD1 178 aaKnown RBP2.87□□□□□ -1.95
CD46-216ENST00000490278 GSDMCQ9BYG8 508 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 DPH5Q9H2P9 285 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 WDR76Q9H967 626 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 B4GALT7Q9UBV7 327 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 APOBEC3BQ9UH17 382 aaKnown RBP2.87□□□□□ -1.95
CD46-216ENST00000490278 CYTH4Q9UIA0 394 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 CRLS1Q9UJA2 301 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 KLHL21Q9UJP4 597 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 B9D1Q9UPM9 204 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 FLVCR1Q9Y5Y0 555 aa2.87□□□□□ -1.95
CD46-216ENST00000490278 CFAP65Q6ZU64 1925 aaKnown RBP2.86□□□□□ -1.95
CD46-216ENST00000490278 IGLV8-61A0A075B6I0 122 aa2.86□□□□□ -1.95
CD46-216ENST00000490278 CDX4O14627 284 aaPredicted RBP2.86□□□□□ -1.95
CD46-216ENST00000490278 LATO43561 262 aa2.86□□□□□ -1.95
CD46-216ENST00000490278 DUX1O43812 170 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms