RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CT45A2Q5DJT8 189 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CCDC122Q5T0U0 273 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 OTUD3Q5T2D3 398 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 LCN1P1Q5VSP4 162 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 TMEM53Q6P2H8 277 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CTR9Q6PD62 1173 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 TTC23LQ6PF05 361 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 NHSQ6T4R5 1651 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 Q6ZPB1 254 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 EIF3MQ7L2H7 374 aaKnown RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 COX8CQ7Z4L0 72 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PRUNE1Q86TP1 453 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 ITIH5Q86UX2 942 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 SPATA24Q86W54 205 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CCDC60Q8IWA6 550 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 EID3Q8N140 333 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 SPATA4Q8NEY3 305 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 OR6M1Q8NGM8 313 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 FAM81AQ8TBF8 368 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC26A7Q8TE54 656 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 DOT1LQ8TEK3 1739 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 GIPC3Q8TF64 312 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 TSEN15Q8WW01 171 aaKnown RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 ASZ1Q8WWH4 475 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 TMEM37Q8WXS4 190 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CACNG8Q8WXS5 425 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 ADIPOR1Q96A54 375 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PHF21AQ96BD5 680 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 OTULINQ96BN8 352 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 SH3YL1Q96HL8 342 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 KRT12Q99456 494 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PCDH11XQ9BZA7 1347 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PRRG3Q9BZD7 231 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 NACA2Q9H009 215 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 NEUROG2Q9H2A3 272 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 BLZF1Q9H2G9 400 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 DPEP2Q9H4A9 486 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 GAREM1Q9H706 876 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 TDRD3Q9H7E2 651 aaKnown RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 AUNIPQ9H7T9 357 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 POLE4Q9NR33 117 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC38A7Q9NVC3 462 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 THEGQ9P2T0 379 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC7A8Q9UHI5 535 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 BCAP29Q9UHQ4 241 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 POMT2Q9UKY4 750 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 KCNS2Q9ULS6 477 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PIGLQ9Y2B2 252 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 OR2W1Q9Y3N9 320 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF175Q9Y473 711 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 GMEB1Q9Y692 573 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 MYH14Q7Z406 1995 aaKnown RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 NUP188Q5SRE5 1749 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 RREB1Q92766 1687 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PAPPAQ13219 1627 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PDS5AQ29RF7 1337 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TRAV6A0A075B6T7 132 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 K7ERQ8 282 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DVL1O14640 695 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 BUB3O43684 328 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DUX1O43812 170 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 WDR1O75083 606 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 KRT6AP02538 564 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 OPN1LWP04000 364 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CT62P0C5K7 136 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ADORA3P0DMS8 318 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TROVE2P10155 538 aaKnown RBP eCLIP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ANPEPP15144 967 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 AMD1P17707 334 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PTNP21246 168 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 MAT2AP31153 395 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 USP8P40818 1118 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TMPOP42166 694 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 MAGEA5P43359 124 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ACADSBP45954 432 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 BRCC3P46736 316 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ATP1B3P54709 279 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CLDN17P56750 224 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DAOAP59103 153 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SEC61BP60468 96 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 RPS4XP62701 263 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 POU3F1Q03052 451 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 GABPAQ06546 454 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TRAP1Q12931 704 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DRP2Q13474 957 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 VGLL4Q14135 290 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TFDP1Q14186 410 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 RBM39Q14498 530 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TMEM132DQ14C87 1099 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 WDR43Q15061 677 aaKnown RBP eCLIP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 OR1C1Q15619 314 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SSX2Q16385 188 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 MICBQ29980 383 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 XKR7Q5GH72 579 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PPP6R3Q5H9R7 873 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 EFHC1Q5JVL4 640 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 NDUFAF5Q5TEU4 345 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 RAET1LQ5VY80 246 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF776Q68DI1 518 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 RTL6Q6ICC9 239 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms