RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 GIN1Q9NXP7 522 aa8.2□□□□□ -1.1
GTF3C5-210ENST00000489842 SH3BP4Q9P0V3 963 aa8.2□□□□□ -1.1
GTF3C5-210ENST00000489842 KCNE3Q9Y6H6 103 aa8.2□□□□□ -1.1
GTF3C5-210ENST00000489842 PRR14LQ5THK1 2151 aa8.2□□□□□ -1.1
GTF3C5-210ENST00000489842 DEFB108AA8MXU0 73 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 NPIPB8E9PQR5 432 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 PIP5K1BO14986 540 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 PDPK1O15530 556 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 COQ9O75208 318 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 OXSR1O95747 527 aaPredicted RBP8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 RAF1P04049 648 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 CD53P19397 219 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 GCKP35557 465 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 MAP3K8P41279 467 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 SLC18A2Q05940 514 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 KEAP1Q14145 624 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 CD226Q15762 336 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 DECR1Q16698 335 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 DEFB113Q30KQ7 82 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 CYP27C1Q4G0S4 372 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 LIPMQ5VYY2 423 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 LCA5Q86VQ0 697 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 KIF18BQ86Y91 864 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 DDIASQ8IXT1 998 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 CLEC4FQ8N1N0 589 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 CIARTQ8N365 385 aaPredicted RBP8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 POC1BQ8TC44 478 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 NINJ1Q92982 152 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 PIK3IP1Q96FE7 263 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 FCRL1Q96LA6 429 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 C1orf50Q9BV19 199 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 REEP4Q9H6H4 257 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 ANKZF1Q9H8Y5 726 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 SLC24A3Q9HC58 644 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 Q9N2J8 555 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 RRAGDQ9NQL2 400 aaPredicted RBP8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 SIRT3Q9NTG7 399 aaPredicted RBP8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 C1orf109Q9NX04 203 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 TAS2R7Q9NYW3 318 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 FOXD3Q9UJU5 478 aaPredicted RBP8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 PACSIN3Q9UKS6 424 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 GRID1Q9ULK0 1009 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 STK38LQ9Y2H1 464 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 TESMINQ9Y4I5 508 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 DNAJC15Q9Y5T4 150 aa8.19□□□□□ -1.1
GTF3C5-210ENST00000489842 NUP214P35658 2090 aaPredicted RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 FLNAP21333 2647 aaKnown RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 SLC28A1O00337 649 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 EIF1AYO14602 144 aaKnown RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 LSM1O15116 133 aaKnown RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 EFNA2O43921 213 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 CXCL13O43927 109 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 PEX11AO75192 247 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 SKAP2O75563 359 aaPredicted RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 KCNK2O95069 426 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 NKX2-2O95096 273 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 PLAUP00749 431 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 CGAP01215 116 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 C1QCP02747 245 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 LAMP1P11279 417 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 PRPS2P11908 318 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 BCKDHAP12694 445 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 PEPDP12955 493 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 LOXP28300 417 aaPredicted RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 EIF1AXP47813 144 aaKnown RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 MANFP55145 182 aaKnown RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 CASP9P55211 416 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 SORDQ00796 357 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 SF3B4Q15427 424 aaKnown RBP eCLIP8.18□□□□□ -1.13e-8■■■□□ 15.9
GTF3C5-210ENST00000489842 TSC22D1Q15714 1073 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 TMEM44Q2T9K0 475 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 UGT3A2Q3SY77 523 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 CCDC153Q494R4 210 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 ARL13AQ5H913 290 aaPredicted RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 KANK2Q63ZY3 851 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 ALKBH2Q6NS38 261 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 CHMP1BQ7LBR1 199 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 CXorf67Q86X51 503 aaPredicted RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 TDRPQ86YL5 185 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 SAMD14Q8IZD0 417 aaPredicted RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 MEIOBQ8N635 442 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 KRTCAP2Q8N6L1 136 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 TWIST2Q8WVJ9 160 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 ROBO4Q8WZ75 1007 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 JADE3Q92613 823 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 CDS1Q92903 461 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 PPCDCQ96CD2 204 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 ERP27Q96DN0 273 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 CCDC126Q96EE4 140 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 LRRC46Q96FV0 321 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 PPP1R36Q96LQ0 422 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 RNF145Q96MT1 663 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 DACH2Q96NX9 599 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 TBL1XR1Q9BZK7 514 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 KLHL4Q9C0H6 718 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 STMN4Q9H169 189 aaPredicted RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 UBTD1Q9HAC8 227 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 FAM120CQ9NX05 1096 aaKnown RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 ZDHHC2Q9UIJ5 367 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms