RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 TMEM204Q9BSN7 226 aa15.19■□□□□ 0.02
TOP3B-217ENST00000489581 ACTR6Q9GZN1 396 aa15.19■□□□□ 0.02
TOP3B-217ENST00000489581 Q9N2J8 555 aa15.19■□□□□ 0.02
TOP3B-217ENST00000489581 C19orf53Q9UNZ5 99 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-217ENST00000489581 MXRA5Q9NR99 2828 aa15.19■□□□□ 0.02
TOP3B-217ENST00000489581 A0A087WV62 115 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 MYO1GB0I1T2 1018 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 TRIM49D1C9J1S8 452 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 UPK1AO00322 258 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 TMCC2O75069 709 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 SS18L1O75177 396 aaPredicted RBP15.18■□□□□ 0.02
TOP3B-217ENST00000489581 UTS2O95399 124 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 IL33O95760 270 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 ANGPTL1O95841 491 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 ANXA4P09525 319 aaPredicted RBP15.18■□□□□ 0.02
TOP3B-217ENST00000489581 IL11P20809 199 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 SERPINB9P50453 376 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 DMTNQ08495 405 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 C17orf67Q0P5P2 114 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 C2orf80Q0P641 193 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 TMEM44Q2T9K0 475 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 ZNF678Q5SXM1 525 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 HEPHL1Q6MZM0 1159 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 HMBOX1Q6NT76 420 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 BEND4Q6ZU67 534 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 GPRIN3Q6ZVF9 776 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 RAB3IL1Q8TBN0 382 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 NANOS1Q8WY41 292 aaKnown RBP15.18■□□□□ 0.02
TOP3B-217ENST00000489581 NPAS1Q99742 590 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 TBL1XR1Q9BZK7 514 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 STOML1Q9UBI4 398 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 NFU1Q9UMS0 254 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 TIMM22Q9Y584 194 aa15.18■□□□□ 0.02
TOP3B-217ENST00000489581 RNF212BA8MTL3 300 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 POC1B-GALNT4F8VUJ3 575 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 CXCL13O43927 109 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 DDCP20711 480 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 RPS4XP62701 263 aaKnown RBP15.17■□□□□ 0.02
TOP3B-217ENST00000489581 ZNHIT3Q15649 155 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-217ENST00000489581 GRAMD1BQ3KR37 738 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 SLC9A6Q92581 669 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 C11orf24Q96F05 449 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-217ENST00000489581 ZNF382Q96SR6 550 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 GLIPR2Q9H4G4 154 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 C12orf49Q9H741 205 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 FANCFQ9NPI8 374 aa15.17■□□□□ 0.02
TOP3B-217ENST00000489581 DDX18Q9NVP1 670 aaKnown RBP15.17■□□□□ 0.02
TOP3B-217ENST00000489581 MRTO4Q9UKD2 239 aaKnown RBP15.17■□□□□ 0.02
TOP3B-217ENST00000489581 MCTS1Q9ULC4 181 aaKnown RBP15.17■□□□□ 0.02
TOP3B-217ENST00000489581 IGLV3-32A0A0A0MS00 114 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 GXYLT2A0PJZ3 443 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 PSMG1O95456 288 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 SYNGR4O95473 234 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 IGKV1D-16P01601 117 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 TAC1P20366 129 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 GABRA3P34903 492 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 PSMD4P55036 377 aaKnown RBP15.16■□□□□ 0.02
TOP3B-217ENST00000489581 PRR5P85299 388 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 ZNF844Q08AG5 666 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 ZNF763Q0D2J5 394 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 SPDYAQ5MJ70 313 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 MFSD12Q6NUT3 480 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 GALNT18Q6P9A2 607 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 STK32CQ86UX6 486 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 OR2L13Q8N349 312 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 CEP112Q8N8E3 955 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 LILRB1Q8NHL6 650 aaPredicted RBP15.16■□□□□ 0.02
TOP3B-217ENST00000489581 ELP4Q96EB1 424 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 TRMT61AQ96FX7 289 aaKnown RBP15.16■□□□□ 0.02
TOP3B-217ENST00000489581 ADGRG7Q96K78 797 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 TMEM237Q96Q45 408 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 KCNA7Q96RP8 456 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 FUT8Q9BYC5 575 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 REG4Q9BYZ8 158 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 CDC42EP4Q9H3Q1 356 aaKnown RBP15.16■□□□□ 0.02
TOP3B-217ENST00000489581 GRPEL1Q9HAV7 217 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 GPR52Q9Y2T5 361 aa15.16■□□□□ 0.02
TOP3B-217ENST00000489581 CUBNO60494 3623 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 TNFSF11O14788 317 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 DLX3O60479 287 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 TP53P04637 393 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-217ENST00000489581 SOD3P08294 240 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 PSMB1P20618 241 aaKnown RBP15.15■□□□□ 0.02
TOP3B-217ENST00000489581 NTSP30990 170 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 CASQ1P31415 396 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 GALNT10Q86SR1 603 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 EXOC3L1Q86VI1 746 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 WDR75Q8IWA0 830 aaKnown RBP15.15■□□□□ 0.02
TOP3B-217ENST00000489581 GATSQ8NAP1 163 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 DCAKDQ8WVC6 231 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 PIK3R3Q92569 461 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 TACO1Q9BSH4 297 aaKnown RBP15.15■□□□□ 0.02
TOP3B-217ENST00000489581 LMF2Q9BU23 707 aaKnown RBP15.15■□□□□ 0.02
TOP3B-217ENST00000489581 SHCBP1LQ9BZQ2 653 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 OR10A4Q9H209 315 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 TMEM185BQ9H7F4 350 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 EQTNQ9NQ60 294 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 MIEF1Q9NQG6 463 aa15.15■□□□□ 0.02
TOP3B-217ENST00000489581 PAQR5Q9NXK6 330 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-217ENST00000489581 TMEM216Q9P0N5 145 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms