RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 VWA5B2Q8N398 1253 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 OR7G1Q8NGA0 311 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 OR52N2Q8NGI0 321 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 FAM57AQ8TBR7 257 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 MIPOL1Q8TD10 442 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 PAQR8Q8TEZ7 354 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 TP53INP1Q96A56 240 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 VKORC1Q9BQB6 163 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 TACO1Q9BSH4 297 aaKnown RBP9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 TTTY12Q9BZ98 90 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 KAT8Q9H7Z6 458 aaKnown RBP9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 ZDHHC11Q9H8X9 412 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 TPT1P8Q9HAU6 139 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 CNIH4Q9P003 139 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 UNC79Q9P2D8 2635 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 CD300AQ9UGN4 299 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 PACSIN3Q9UKS6 424 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 NBPF19A0A087WUL8 3843 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 A0A0G2JMM0 328 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 A0A1W2PPB8 328 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 A0A1W2PRS3 328 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 PRAMEF27A3QJZ7 478 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 PINLYPA6NC86 204 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 PRORSD1PA6NEY8 169 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 FAM166BA8MTA8 275 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 KIR3DP1A8MWS1 328 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 G3V3Y1 287 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 HNRNPRO43390 633 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 TNFRSF21O75509 655 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 ANP32DO95626 131 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 TPOP07202 933 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 NUDT7P0C024 238 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 FBXO45P0C2W1 286 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 ACP2P11117 423 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 BMP2P12643 396 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 GPC1P35052 558 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 SOAT1P35610 550 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 TMED10P49755 219 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 CASP9P55211 416 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 NRG3P56975 720 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 RPS26P62854 115 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 ADORA2A-AS1P86434 159 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 RGNQ15493 299 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 ADRM1Q16186 407 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 FXNQ16595 210 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 MFSD12Q6NUT3 480 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 ZFP1Q6P2D0 407 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 PTOV1Q86YD1 416 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 FAM109AQ8N4B1 249 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF441Q8N8Z8 693 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 C17orf47Q8NEP4 570 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 NUP43Q8NFH3 380 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 OR52R1Q8NGF1 315 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 PNPT1Q8TCS8 783 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 C16orf58Q96GQ5 468 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 CLPTM1LQ96KA5 538 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 VSTM2LQ96N03 204 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF583Q96ND8 569 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 DEFB127Q9H1M4 99 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 OR10A5Q9H207 317 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 SH2D2AQ9NP31 389 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 CHST11Q9NPF2 352 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 ZCCHC3Q9NUD5 404 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 DDX18Q9NVP1 670 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 STX18Q9P2W9 335 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 BOKQ9UMX3 212 aaPredicted RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 PCDHGB4Q9UN71 923 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 CFL2Q9Y281 166 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 AP3M1Q9Y2T2 418 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 SNX8Q9Y5X2 465 aa9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 UTP20O75691 2785 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-208ENST00000489554 C15orf38-AP3S2A0A0A6YYH1 394 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 OR14I1A6ND48 311 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TP53I11O14683 189 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 PDE9AO76083 593 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 IGHG3P01860 377 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 HMGN2P05204 90 aaKnown RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 ETFAP13804 333 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 ME2P23368 584 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 PIGAP37287 484 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 DNASE1L1P49184 302 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 GSK3BP49841 420 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 NR0B1P51843 470 aaKnown RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 RPP38P78345 283 aaKnown RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC34A1Q06495 639 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 FUT5Q11128 374 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 FOXO1Q12778 655 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TRAP1Q12931 704 aaKnown RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TP53BP2Q13625 1128 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 KPNB1Q14974 876 aaKnown RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 NTRK2Q16620 822 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF630Q2M218 657 aaPredicted RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 SAMD4BQ5PRF9 694 aaKnown RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TBCELQ5QJ74 424 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 SP5Q6BEB4 398 aaPredicted RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TMEM211Q6ICI0 200 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 NPSR1Q6W5P4 371 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 WDR53Q7Z5U6 358 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms