RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 COMMD10Q9Y6G5 202 aa6.59□□□□□ -1.35
EXOSC3-206ENST00000489414 TRAV20A0A0B4J274 112 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 CCDC162PA2VCL2 907 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 TRPC5OSA6NMA1 111 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 PLOD2O00469 737 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ITM2AO43736 263 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 MGRN1O60291 552 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 RDH16O75452 317 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 LYPLA1O75608 230 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 CIB2O75838 187 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 SRP72O76094 671 aaKnown RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 JTBO76095 146 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 MYO1DO94832 1006 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 NDUFA7O95182 113 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ENO1P06733 434 aaKnown RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ALOX15P16050 662 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 IL1RNP18510 177 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 NCF2P19878 526 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 GABRB3P28472 473 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 HNRNPH1P31943 449 aaKnown RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 RPL14P50914 215 aaKnown RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF140P52738 457 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 NAA20P61599 178 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ZP4Q12836 540 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 MSLNQ13421 630 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 GRB7Q14451 532 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 P2RY6Q15077 328 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 DNAL1Q4LDG9 190 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 SYTL3Q4VX76 610 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 METTL21CQ5VZV1 264 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ZFAND6Q6FIF0 208 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 UGT3A1Q6NUS8 523 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 OPN5Q6U736 354 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF793Q6ZN11 406 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 QSOX2Q6ZRP7 698 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 FAM214BQ7L5A3 538 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 P4HA3Q7Z4N8 544 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 CENPLQ8N0S6 344 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 OR4K2Q8NGD2 314 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 OR51F2Q8NH61 342 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 HEXDCQ8WVB3 486 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 STON2Q8WXE9 905 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 RERGQ96A58 199 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 CMTM5Q96DZ9 223 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 CDKN2AIPNLQ96HQ2 116 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF597Q96LX8 424 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF48Q96MX3 618 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 PTCHD1Q96NR3 888 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 NDNQ99608 321 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 BTBD10Q9BSF8 475 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 TRMOQ9BU70 441 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 NMUR2Q9GZQ4 415 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 DENND2DQ9H6A0 471 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 TAS2R13Q9NYV9 303 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 XPR1Q9UBH6 696 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 ASH2LQ9UBL3 628 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 TAGLN3Q9UI15 199 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 RNF114Q9Y508 228 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 PMF1-BGLAPU3KQ54 211 aa6.58□□□□□ -1.36
EXOSC3-206ENST00000489414 CCDC189A1A4V9 331 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 SYCE1LA8MT33 242 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 E5RI56 91 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 ABCD4O14678 606 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 HDAC3O15379 428 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 BUD23O43709 281 aaKnown RBP6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 XPNPEP2O43895 674 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 PRKRAO75569 313 aaKnown RBP6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 ATP6V1G2O95670 118 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 F7P08709 466 aaPredicted RBP6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 KRT16P08779 473 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 PGCP20142 388 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 PRDX6P30041 224 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 PROK1P58294 105 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 ATP6V0D1P61421 351 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 MAP4K2Q12851 820 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 DOC2AQ14183 400 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF791Q3KP31 576 aaPredicted RBP6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 TECRLQ5HYJ1 363 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 TOR1AIP1Q5JTV8 583 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 RBM20Q5T481 1227 aaKnown RBP6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 PDSS2Q86YH6 399 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 NKAPQ8N5F7 415 aaKnown RBP6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 TEX9Q8N6V9 391 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 OR13C4Q8NGS5 318 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 OR2A1Q8NGT9 310 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 STMN2Q93045 179 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 TBC1D20Q96BZ9 403 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 SORT1Q99523 831 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 C19orf43Q9BQ61 176 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 DPH7Q9BTV6 452 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 DOHHQ9BU89 302 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 C20orf27Q9GZN8 174 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 MMADHCQ9H3L0 296 aaPredicted RBP6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 TCF7L2Q9NQB0 619 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 PFDN4Q9NQP4 134 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 ARL8BQ9NVJ2 186 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 PNPOQ9NVS9 261 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 C1RLQ9NZP8 487 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 CIDEBQ9UHD4 219 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms