RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CFL1P23528 166 aaKnown RBP16.62■□□□□ 0.25
NPHP4-209ENST00000489180 GK2Q14410 553 aaPredicted RBP16.62■□□□□ 0.25
NPHP4-209ENST00000489180 SAP130Q9H0E3 1048 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 GORASP2Q9H8Y8 452 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 IL37Q9NZH6 218 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 F8W036 122 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 DUX1O43812 170 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 PRSS3P35030 304 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 BLOC1S1P78537 153 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 INAVAQ3KP66 663 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 DIO2Q92813 273 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 PFDN5Q99471 154 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 PINK1Q9BXM7 581 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 BRINP1O60477 761 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 NCR1O76036 304 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 LIPCP11150 499 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 CRHBPP24387 322 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 MGAT3Q09327 533 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 ELOAQ14241 798 aaKnown RBP16.62■□□□□ 0.25
NPHP4-209ENST00000489180 P2RY14Q15391 338 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 CTSL3PQ5NE16 218 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 ZNF767PQ75MW2 155 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 ZNF619Q8N2I2 560 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 PARP16Q8N5Y8 322 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 SYNPRQ8TBG9 265 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 DCNP07585 359 aaKnown RBP16.62■□□□□ 0.25
NPHP4-209ENST00000489180 OR51T1Q8NGJ9 327 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 ITPKCQ96DU7 683 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 MEPEQ9NQ76 525 aaPredicted RBP16.62■□□□□ 0.25
NPHP4-209ENST00000489180 NUBP2Q9Y5Y2 271 aa16.62■□□□□ 0.25
NPHP4-209ENST00000489180 ZNF701M0R085 212 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-209ENST00000489180 CRTAPO75718 401 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-209ENST00000489180 ITGAMP11215 1152 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 IFNGR1P15260 489 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 C3orf58Q8NDZ4 430 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 GLYATL2Q8WU03 294 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 TMEM239Q8WW34 195 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 PELOQ9BRX2 385 aaKnown RBP16.61■□□□□ 0.25
NPHP4-209ENST00000489180 B3GNT3Q9Y2A9 372 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 UGDHO60701 494 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 HMGN2P05204 90 aaKnown RBP16.61■□□□□ 0.25
NPHP4-209ENST00000489180 MAGEA6P43360 314 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 NKX3-2P78367 333 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 RUNX3Q13761 415 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 GGHQ92820 318 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 PHB2Q99623 299 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 SLC2A11Q9BYW1 496 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 ANTXRLA6NF34 631 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 UNCXA6NJT0 531 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 LDB3O75112 727 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 HTR3BO95264 441 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 HNRNPA1P09651 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
NPHP4-209ENST00000489180 UGT2B7P16662 529 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 ALDH16A1Q8IZ83 802 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 TOMM40LQ969M1 308 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 SLC6A16Q9GZN6 736 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 SFXN1Q9H9B4 322 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 TRAV27A0A087WT01 109 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 MROH6A6NGR9 719 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 AGPAT2O15120 278 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 YY2O15391 372 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 PRAMEF2O60811 474 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 SRYQ05066 204 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 MBTPS1Q14703 1052 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 KIAA1211LQ6NV74 962 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 LIPIQ6XZB0 460 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 LMNTD1Q8N9Z9 388 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 FAM71F1Q96KD3 344 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-209ENST00000489180 SERINC2Q96SA4 455 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 ST6GALNAC5Q9BVH7 336 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 ALOXE3Q9BYJ1 711 aa16.61■□□□□ 0.25
NPHP4-209ENST00000489180 MEIOCA2RUB1 952 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 FAM183AA6NL82 134 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 SGK494L7N484 410 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 EIF3FO00303 357 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-209ENST00000489180 FUT1P19526 365 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 C5AR1P21730 350 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 CCR7P32248 378 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 RGS6P49758 472 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 LUMP51884 338 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-209ENST00000489180 SF3A2Q15428 464 aaKnown RBP16.6■□□□□ 0.25
NPHP4-209ENST00000489180 NADSYN1Q6IA69 706 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 IL20RBQ6UXL0 311 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 FOXN4Q96NZ1 517 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 ZFYVE21Q9BQ24 234 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 OR51J1Q9H342 316 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 C7orf72A4D263 438 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 ENDOUP21128 410 aaKnown RBP16.6■□□□□ 0.25
NPHP4-209ENST00000489180 SSTR2P30874 369 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 CAV3P56539 151 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 ACSM3Q53FZ2 586 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 ZNF100Q8IYN0 542 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 DDIT4LQ96D03 193 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 OR5B12Q96R08 314 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 NAA11Q9BSU3 229 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-209ENST00000489180 CLMPQ9H6B4 373 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 OR6C2Q9NZP2 312 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 A0A1W2PQ09 198 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 B8ZZF3 427 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 H3BML4 177 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms