RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 CALM2P0DP24 149 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 CALM3P0DP25 149 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 CALCBP10092 127 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 HOXB6P17509 224 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 TSPAN8P19075 237 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 TNNI3P19429 210 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 PTPN4P29074 926 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 CASP14P31944 242 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 TRIM23P36406 574 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ACAA2P42765 397 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 CRIP2P52943 208 aaPredicted RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ATP12AP54707 1039 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 TIMM10P62072 90 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 GSTO1P78417 241 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 FKBP3Q00688 224 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 FUT7Q11130 342 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 HNRNPA0Q13151 305 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 NFATC2Q13469 925 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ENPP2Q13822 863 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ZKSCAN8Q15776 578 aaPredicted RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 PARP6Q2NL67 630 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 CCDC57Q2TAC2 916 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ADPRMQ3LIE5 342 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 KLHL22Q53GT1 634 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 MUC21Q5SSG8 566 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 AGAP7PQ5VUJ5 663 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF329Q86UD4 541 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 VPS36Q86VN1 386 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 LMNTD2Q8IXW0 634 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 CNPY4Q8N129 248 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 EIF1ADQ8N9N8 165 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 OR8K1Q8NGG5 319 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 AENQ8WTP8 325 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 PINX1Q96BK5 328 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 PAGE5Q96GU1 130 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 CAPNS2Q96L46 248 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 RHOXF2Q9BQY4 288 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 NUP58Q9BVL2 599 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF416Q9BWM5 594 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ELL3Q9HB65 397 aaPredicted RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 PALMDQ9NP74 551 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 SAMSN1Q9NSI8 373 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 DEPPQ9NTK1 212 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 RBM28Q9NW13 759 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 THYN1Q9P016 225 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 P2RX2Q9UBL9 471 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 FZR1Q9UM11 496 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 MGAT4AQ9UM21 535 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 SAR1BQ9Y6B6 198 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ABCB11O95342 1321 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 PCDH11XQ9BZA7 1347 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 NHSQ6T4R5 1651 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 WDR81Q562E7 1941 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 XIRP1Q702N8 1843 aaKnown RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 ARFGEF1Q9Y6D6 1849 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 A0A0U1RQV5 110 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 H3BMH7 237 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 ARHGEF9O43307 516 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 IDH3BO43837 385 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 ZG16O60844 167 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 KIAA0754O94854 1291 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 APBB3O95704 486 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 HPRP00739 348 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 OR9G9P0C7N8 305 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 TRIM49P0CI25 452 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 TRIM49CP0CI26 452 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 KRT13P13646 458 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 TCP1P17987 556 aaKnown RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF10P21506 573 aaPredicted RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 PTPN6P29350 595 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 HNRNPH3P31942 346 aaKnown RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 LONP1P36776 959 aaKnown RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 SGSHP51688 502 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 SLC7A2P52569 658 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 GSCP56915 257 aaPredicted RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 SRPXP78539 464 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 OVGP1Q12889 678 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 CALCOCO2Q13137 446 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 SLC39A6Q13433 755 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF146Q15072 292 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 UNC50Q53HI1 259 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 CCDC122Q5T0U0 273 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 RIPPLY2Q5TAB7 128 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF658Q5TYW1 1059 aaPredicted RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 RHBDD2Q6NTF9 364 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 KIAA1328Q86T90 577 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 RANBP3LQ86VV4 465 aaPredicted RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF573Q86YE8 665 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 MREGQ8N565 214 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 SAMD12Q8N8I0 201 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 OR4F5Q8NH21 305 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 THRSPQ92748 146 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 MCHR2Q969V1 340 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 VPS39Q96JC1 886 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 ALS2CR12Q96Q35 445 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 TSPAN18Q96SJ8 248 aa3.94□□□□□ -1.78
SRRM1-215ENST00000488317 WRAP53Q9BUR4 548 aaKnown RBP3.94□□□□□ -1.78
SRRM1-215ENST00000488317 APOOQ9BUR5 198 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms