RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 MARCH3Q86UD3 253 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 GGNQ86UU5 652 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 EXOC3L1Q86VI1 746 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CDC20BQ86Y33 519 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 UBQLNLQ8IYU4 475 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CDRT4Q8N9R6 151 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SLC16A11Q8NCK7 471 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 OR5M1Q8NGP8 315 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ZFP28Q8NHY6 868 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 NINJ1Q92982 152 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CAVIN3Q969G5 261 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 FAM120BQ96EK7 910 aaKnown RBP10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 DTNBP1Q96EV8 351 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 LRRC46Q96FV0 321 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 NPAS1Q99742 590 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 KLHDC3Q9BQ90 382 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ACBD3Q9H3P7 528 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ACSS1Q9NUB1 689 aaPredicted RBP10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PACSIN3Q9UKS6 424 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ZANQ9Y493 2812 aa10.12□□□□□ -0.79
RAB11FIP3-210ENST00000487899 TUBAL3A6NHL2 446 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SLC22A20A6NK97 555 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 TTC36A6NLP5 189 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ALG1L2C9J202 215 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 H3BML4 177 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SKAP2O75563 359 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 KCNH1O95259 989 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PRPS2P11908 318 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CD1EP15812 388 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 GABRA3P34903 492 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CPOXP36551 454 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ASMTP46597 345 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PSMD4P55036 377 aaKnown RBP10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 DAZAP2Q15038 168 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 GUSBP1Q15486 140 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 KRTAP21-3Q3LHN1 58 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 WDR93Q6P2C0 686 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 EMBQ6PCB8 327 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PAMR1Q6UXH9 720 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SZRD1Q7Z422 152 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 LUZP2Q86TE4 346 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 METTL25Q8N6Q8 603 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 NUP43Q8NFH3 380 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 OR7A2PQ8NGA2 310 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 OR4C3Q8NH37 302 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 LINC01560Q8TB33 94 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 GPR151Q8TDV0 419 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 NUDT8Q8WV74 236 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 FIG4Q92562 907 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 MTERF3Q96E29 417 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 C16orf58Q96GQ5 468 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 C1orf50Q9BV19 199 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 RBM24Q9BX46 236 aaKnown RBP10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 TBL1XR1Q9BZK7 514 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 RNF122Q9H9V4 155 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CCM2LQ9NUG4 571 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 FBXO34Q9NWN3 711 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ATP6V1HQ9UI12 483 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ZNF337Q9Y3M9 751 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 TRAF6Q9Y4K3 522 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 V9GYY5 206 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PRR14LQ5THK1 2151 aa10.11□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SIAH2O43255 324 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SEC14L5O43304 696 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 GMFGO60234 142 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 KCNK2O95069 426 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 BPGMP07738 259 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 EPXP11678 715 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PEPDP12955 493 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ZNF17P17021 662 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PSMA4P25789 261 aaKnown RBP10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SERPINB5P36952 375 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 HPCAL1P37235 193 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PRKAG1P54619 331 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 MANFP55145 182 aaKnown RBP10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 MLC1Q15049 377 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CD226Q15762 336 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PLPPR5Q32ZL2 321 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CCNJQ5T5M9 372 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 FIGNL1Q6PIW4 674 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 KIF18BQ86Y91 864 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 MREGQ8N565 214 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 GATSQ8NAP1 163 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PSMA8Q8TAA3 256 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 FNDC9Q8TBE3 224 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 FAM110BQ8TC76 370 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 DUSP19Q8WTR2 217 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SLC9A6Q92581 669 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 STARD4Q96DR4 205 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ZNF845Q96IR2 970 aaPredicted RBP10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PKNOX2Q96KN3 472 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PPP3R2Q96LZ3 170 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 FOXC2Q99958 501 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PIGMQ9H3S5 423 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 CXorf36Q9H7Y0 433 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 C3orf14Q9HBI5 128 aa10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 ZCCHC3Q9NUD5 404 aaKnown RBP10.1□□□□□ -0.79
RAB11FIP3-210ENST00000487899 SH3BP4Q9P0V3 963 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms