RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ERICH5Q6P6B1 374 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 ISLR2Q6UXK2 745 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 ULK2Q8IYT8 1036 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 ARHGAP24Q8N264 748 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 HIPK4Q8NE63 616 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 OR5M3Q8NGP4 307 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 ASB15Q8WXK1 588 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 HGDQ93099 445 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 UTP4Q969X6 686 aaKnown RBP11.74□□□□□ -0.53
HDAC6-229ENST00000486665 COL21A1Q96P44 957 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 TREX2Q9BQ50 279 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-229ENST00000486665 RSPO3Q9BXY4 272 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF350Q9GZX5 532 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 SAP130Q9H0E3 1048 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 QRSL1Q9H0R6 528 aaKnown RBP11.74□□□□□ -0.53
HDAC6-229ENST00000486665 BCL2L10Q9HD36 194 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 TEKT2Q9UIF3 430 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 WDR45Q9Y484 360 aa11.74□□□□□ -0.53
HDAC6-229ENST00000486665 A0A0G2JPF8 293 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 CENPVL1A0A0U1RR11 272 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 TMEM247A6NEH6 219 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 OR6C70A6NIJ9 312 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 HNRNPCL2B2RXH8 293 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 HNRNPCL3B7ZW38 293 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 NPIPB9F8W1W9 429 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 UTS2O95399 124 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 GUSBP08236 651 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 HNRNPCL4P0DMR1 293 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 IL12BP29460 328 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 AQP1P29972 269 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 KRT20P35900 424 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 CD96P40200 585 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 HLCSP50747 726 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 RNF144AP50876 292 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-229ENST00000486665 CRISP3P54108 245 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 PCBP3P57721 371 aaKnown RBP11.73□□□□□ -0.53
HDAC6-229ENST00000486665 KCNJ2P63252 427 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 PSPHP78330 225 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 MFAP5Q13361 173 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 TUBA3CQ13748 450 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 VEZF1Q14119 521 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 FXNQ16595 210 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 NTRK2Q16620 822 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 GRAMD1BQ3KR37 738 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 SPATS1Q496A3 300 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 FLYWCH1Q4VC44 716 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 HIST2H2BCQ6DN03 193 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 TUBA3EQ6PEY2 450 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 OPN5Q6U736 354 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 NUP54Q7Z3B4 507 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF227Q86WZ6 799 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 TMEM156Q8N614 296 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 METTL25Q8N6Q8 603 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 OR10G3Q8NGC4 313 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 OR4C3Q8NH37 302 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 MCUR1Q96AQ8 359 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 SPACA9Q96E40 222 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-229ENST00000486665 NODALQ96S42 347 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 G6PC3Q9BUM1 346 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 MTHFD2LQ9H903 347 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-229ENST00000486665 ANAPC2Q9UJX6 822 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 MRTO4Q9UKD2 239 aaKnown RBP11.73□□□□□ -0.53
HDAC6-229ENST00000486665 TP53TG5Q9Y2B4 290 aa11.73□□□□□ -0.53
HDAC6-229ENST00000486665 DOCK10Q96BY6 2186 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 DSPPQ9NZW4 1301 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 M0QX08 132 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 CXCR6O00574 342 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 GSTA4O15217 222 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 KIAA0513O60268 411 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 ABCB7O75027 752 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 ICOSLGO75144 302 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 UGT2B17O75795 530 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 GP1BBP13224 206 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 GGT1P19440 569 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 ATP6V1C1P21283 382 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 KDELR2P33947 212 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 CRYBA2P53672 197 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 PSMD4P55036 377 aaKnown RBP11.72□□□□□ -0.53
HDAC6-229ENST00000486665 EFR3AQ14156 821 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 GNA13Q14344 377 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 PRAMEF8Q5VWM4 474 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 PRAMEF7Q5VXH5 474 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 GLYATQ6IB77 296 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 IGFL2Q6UWQ7 119 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 APOOLQ6UXV4 268 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 CCDC80Q76M96 950 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 MDGA2Q7Z553 956 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF619Q8N2I2 560 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 BBS10Q8TAM1 723 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 FIG4Q92562 907 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 MIB2Q96AX9 1013 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 SIGLEC12Q96PQ1 595 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 SMAD5Q99717 465 aaKnown RBP11.72□□□□□ -0.53
HDAC6-229ENST00000486665 RTN4RQ9BZR6 473 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 TRIM45Q9H8W5 580 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-229ENST00000486665 SH2D2AQ9NP31 389 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 POLE3Q9NRF9 147 aa11.72□□□□□ -0.53
HDAC6-229ENST00000486665 HPF1Q9NWY4 346 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms