RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 LSM3P62310 102 aaKnown RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 ZXDAP98168 799 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 MAT1AQ00266 395 aaKnown RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 ZNF91Q05481 1191 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 NR1D2Q14995 579 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 ACSM5Q6NUN0 579 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 MRGPREQ86SM8 312 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 EGLN3Q9H6Z9 239 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 KCNE5Q9UJ90 142 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 SLC7A7Q9UM01 511 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 PCDH15Q96QU1 1955 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 SPTBP11277 2137 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 TRAPPC13A5PLN9 417 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 EFCAB9A8MZ26 197 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 ZNF749O43361 778 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 TLX2O43763 284 aaPredicted RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 KCNK2O95069 426 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 PDGFBP01127 241 aaPredicted RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 DBTP11182 482 aaKnown RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 HOXA6P31267 233 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 AFF3P51826 1226 aaKnown RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 ZNF829Q3KNS6 432 aaPredicted RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 TSSK4Q6SA08 328 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 WDR36Q8NI36 951 aaKnown RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 TMEM255BQ8WV15 326 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 BORCS5Q969J3 196 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 LGALS12Q96DT0 336 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 MMABQ96EY8 250 aaPredicted RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 DGAT2Q96PD7 388 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 TSSK6Q9BXA6 273 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 ALOXE3Q9BYJ1 711 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 NLGN3Q9NZ94 848 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 TESQ9UGI8 421 aaKnown RBP18.9■□□□□ 0.62
HPS3-206ENST00000486530 RNF215Q9Y6U7 377 aa18.9■□□□□ 0.62
HPS3-206ENST00000486530 NPIPA5A0A0B4J1W7 369 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 NPIPA7E9PJI5 369 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 H0YIG0 161 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 BCAT2O15382 392 aaPredicted RBP18.89■□□□□ 0.61
HPS3-206ENST00000486530 KLF4O43474 513 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 AIREO43918 545 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 CDC123O75794 336 aaPredicted RBP18.89■□□□□ 0.61
HPS3-206ENST00000486530 NPIPA8P0DM63 369 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 SERPINB10P48595 397 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 EMDP50402 254 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 HSD17B7P56937 341 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 NCS1P62166 190 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 EFNB1P98172 346 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 PSG6Q00889 435 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 GRM7Q14831 915 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 NCF4Q15080 339 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 DGUOKQ16854 277 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 ARMCX4Q5H9R4 360 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 LINC00299Q6ZSB3 139 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 SLCO6A1Q86UG4 719 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 MEX3DQ86XN8 651 aaKnown RBP18.89■□□□□ 0.61
HPS3-206ENST00000486530 NRMQ8IXM6 262 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 CARFQ8N187 725 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 TMEM80Q96HE8 168 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 ZNF578Q96N58 590 aaPredicted RBP18.89■□□□□ 0.61
HPS3-206ENST00000486530 DSN1Q9H410 356 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 TAS2R16Q9NYV7 291 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 LRIT1Q9P2V4 623 aa18.89■□□□□ 0.61
HPS3-206ENST00000486530 A0A1B0GVG6 124 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 PRAMEF2O60811 474 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 CSTF2P33240 577 aaKnown RBP eCLIP18.88■□□□□ 0.611e-6■■■□□ 19.1
HPS3-206ENST00000486530 SNAPC1Q16533 368 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 FLYWCH1Q4VC44 716 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 SYT14P1Q58G82 188 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 WDR45BQ5MNZ6 344 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 NKAIN2Q5VXU1 208 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 RNLSQ5VYX0 342 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 OR8D4Q8NGM9 314 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 TMEM163Q8TC26 289 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 DYNC2LI1Q8TCX1 351 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 OSTF1Q92882 214 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 RPL3LQ92901 407 aaKnown RBP18.88■□□□□ 0.61
HPS3-206ENST00000486530 FGF11Q92914 225 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 AHCYL2Q96HN2 611 aaKnown RBP18.88■□□□□ 0.61
HPS3-206ENST00000486530 SLC38A2Q96QD8 506 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 OCEL1Q9H607 264 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 C14orf105Q9NVL8 296 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 NTN1O95631 604 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 RPLP0P05388 317 aaKnown RBP18.88■□□□□ 0.61
HPS3-206ENST00000486530 ADRA2AP08913 450 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 HTR2AP28223 471 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 CLK1P49759 484 aaKnown RBP18.88■□□□□ 0.61
HPS3-206ENST00000486530 MLLT10P55197 1068 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 OR1Q1Q15612 314 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 POGLUT1Q8NBL1 392 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 LRR1Q96L50 414 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 VSTM2LQ96N03 204 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 PELOQ9BRX2 385 aaKnown RBP18.88■□□□□ 0.61
HPS3-206ENST00000486530 TEX12Q9BXU0 123 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 RACGAP1Q9H0H5 632 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 CAPN10Q9HC96 672 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 CLDN16Q9Y5I7 305 aa18.88■□□□□ 0.61
HPS3-206ENST00000486530 CCDC163A0A0D9SF12 145 aa18.87■□□□□ 0.61
HPS3-206ENST00000486530 NUDT21O43809 227 aaKnown RBP18.87■□□□□ 0.61
HPS3-206ENST00000486530 PIP5K1CO60331 668 aa18.87■□□□□ 0.61
HPS3-206ENST00000486530 GKN3PP0CG01 181 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms