RNA–Protein interactions for RNA: ENST00000486144.1

SERF2-216, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-216	ENST00000486144	CPSF4	O95639	269 aa	Known RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	CD1E	P15812	388 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	DDX5	P17844	614 aa	Known RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	CAPN3	P20807	821 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	SOAT1	P35610	550 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	CCT3	P49368	545 aa	Known RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	CLNS1A	P54105	237 aa	Known RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	TP53BP2	Q13625	1128 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	LASP1	Q14847	261 aa	Known RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	HYAL4	Q2M3T9	481 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	PDCD4	Q53EL6	469 aa	Known RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	PAOX	Q6QHF9	649 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144		Q6ZPB1	254 aa	Predicted RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	ZAR1	Q86SH2	424 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	MIER2	Q8N344	545 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	NATD1	Q8N6N6	113 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	RNF138	Q8WVD3	245 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	SLC9A6	Q92581	669 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	JSRP1	Q96MG2	331 aa	Predicted RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	SECISBP2	Q96T21	854 aa	Known RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	RTN4R	Q9BZR6	473 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	SERHL2	Q9H4I8	314 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	ZDHHC11	Q9H8X9	412 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144		Q9N2J8	555 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	PRPF19	Q9UMS4	504 aa	Known RBP	11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	MAPRE3	Q9UPY8	281 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	ZNF835	Q9Y2P0	537 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144	KCNE3	Q9Y6H6	103 aa		11.11	□□□□□ -0.63
SERF2-216	ENST00000486144		A0A1B0GTH9	108 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	PRSS51	A0A1B0GVH4	220 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	PRAMEF25	A6NGN4	478 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	GNB5	O14775	395 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CDC40	O60508	579 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	ICOSLG	O75144	302 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CLDN14	O95500	239 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	IL12B	P29460	328 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	S100A3	P33764	101 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CDKN2C	P42773	168 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	RFX3	P48380	749 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	MAN2A2	P49641	1150 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	PNLIPRP2	P54317	469 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CASP9	P55211	416 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	RPS26	P62854	115 aa	Known RBP	11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	MRPS22	P82650	360 aa	Known RBP	11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	PRR5	P85299	388 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	ZNHIT3	Q15649	155 aa	Predicted RBP	11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	C3AR1	Q16581	482 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	DPY19L1	Q2PZI1	675 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	SPDYE7P	Q495Y7	208 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CYP27C1	Q4G0S4	372 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	COQ5	Q5HYK3	327 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CCNJ	Q5T5M9	372 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	TMEM81	Q6P7N7	255 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	FIGNL1	Q6PIW4	674 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	RINL	Q6ZS11	566 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	SLC22A16	Q86VW1	577 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	SPPL2C	Q8IUH8	684 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	FAM109A	Q8N4B1	249 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CDRT4	Q8N9R6	151 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	RBM15B	Q8NDT2	890 aa	Known RBP	11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	OR4A15	Q8NGL6	344 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	SFXN5	Q8TD22	340 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	GPR151	Q8TDV0	419 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CDS1	Q92903	461 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	RMND5B	Q96G75	393 aa	Predicted RBP	11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	GNRHR2	Q96P88	292 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	INPP5K	Q9BT40	448 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	OSBPL11	Q9BXB4	747 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	CADM1	Q9BY67	442 aa	Known RBP	11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	TRIM8	Q9BZR9	551 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	METTL7A	Q9H8H3	244 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	NEUROD4	Q9HD90	331 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	ZFP64	Q9NPA5	681 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	PLSCR2	Q9NRY7	297 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	SLC6A13	Q9NSD5	602 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	TINAG	Q9UJW2	476 aa		11.1	□□□□□ -0.63
SERF2-216	ENST00000486144	TACC2	O95359	2948 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	RNF103-CHMP3	A0A140T963	221 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	ACOT7	O00154	380 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	ABCB7	O75027	752 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	SLC22A3	O75751	556 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	KCNK2	O95069	426 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	IL33	O95760	270 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	PGR	P06401	933 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	SNRPB2	P08579	225 aa	Known RBP	11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	ALOX5	P09917	674 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	ENDOU	P21128	410 aa	Known RBP	11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	PTPN6	P29350	595 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	KRT20	P35900	424 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	PRIM2	P49643	509 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	GAS1	P54826	345 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	RPP38	P78345	283 aa	Known RBP	11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	ADORA2A-AS1	P86434	159 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	EFR3A	Q14156	821 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	SNCB	Q16143	134 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	DECR1	Q16698	335 aa		11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	TRMT5	Q32P41	509 aa	Known RBP	11.09	□□□□□ -0.63
SERF2-216	ENST00000486144	TBCEL	Q5QJ74	424 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms