RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 POP5Q969H6 163 aaKnown RBP15.66■□□□□ 0.1
VIM-205ENST00000485947 RASL10BQ96S79 203 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 PCDHAC1Q9H158 963 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 ZNF639Q9UID6 485 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 NPIPA1Q9UND3 350 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 KLF2Q9Y5W3 355 aaPredicted RBP15.66■□□□□ 0.1
VIM-205ENST00000485947 CELSR2Q9HCU4 2923 aa15.66■□□□□ 0.1
VIM-205ENST00000485947 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 ARPC2O15144 300 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 GSTA4O15217 222 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 PRKNO60260 465 aaPredicted RBP15.65■□□□□ 0.1
VIM-205ENST00000485947 SOX30O94993 753 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 PSMG1O95456 288 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 AGR2O95994 175 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 ETFAP13804 333 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 MATN1P21941 496 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 PCGF2P35227 344 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 SOX18P35713 384 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 MEOX1P50221 254 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 PRKAG1P54619 331 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 MRPS35P82673 323 aaKnown RBP15.65■□□□□ 0.1
VIM-205ENST00000485947 ZNF630Q2M218 657 aaPredicted RBP15.65■□□□□ 0.1
VIM-205ENST00000485947 COX20Q5RI15 118 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 FAM111BQ6SJ93 734 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 PTOV1Q86YD1 416 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 C10orf111Q8N326 155 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 ZNF808Q8N4W9 903 aaPredicted RBP15.65■□□□□ 0.1
VIM-205ENST00000485947 METTL25Q8N6Q8 603 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 C11orf65Q8NCR3 313 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 OR52E4Q8NGH9 312 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 SLC22A8Q8TCC7 542 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 PPWD1Q96BP3 646 aaKnown RBP15.65■□□□□ 0.1
VIM-205ENST00000485947 GIMAP5Q96F15 307 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 LRGUKQ96M69 825 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 ACTRT3Q9BYD9 372 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 PIF1Q9H611 641 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 GMPR2Q9P2T1 348 aaKnown RBP15.65■□□□□ 0.1
VIM-205ENST00000485947 EGFL7Q9UHF1 273 aa15.65■□□□□ 0.1
VIM-205ENST00000485947 FAF1Q9UNN5 650 aaPredicted RBP15.65■□□□□ 0.1
VIM-205ENST00000485947 DIDO1Q9BTC0 2240 aaKnown RBP15.65■□□□□ 0.1
VIM-205ENST00000485947 MYOCOSA0A1B0GUC4 107 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 A1L4Q6 167 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 DUXAA6NLW8 204 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 AQP12BA6NM10 295 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 CCL21O00585 134 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 ZG16O60844 167 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 C1QCP02747 245 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 HMGN2P05204 90 aaKnown RBP15.64■□□□□ 0.09
VIM-205ENST00000485947 CT62P0C5K7 136 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 ARAFP10398 606 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 PTGER1P34995 402 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 MSX2P35548 267 aaPredicted RBP15.64■□□□□ 0.09
VIM-205ENST00000485947 FUT7Q11130 342 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 LASP1Q14847 261 aaKnown RBP15.64■□□□□ 0.09
VIM-205ENST00000485947 TRMT12Q53H54 448 aaKnown RBP15.64■□□□□ 0.09
VIM-205ENST00000485947 GLYATQ6IB77 296 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 CDC73Q6P1J9 531 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 XKRXQ6PP77 449 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 AQP12AQ8IXF9 295 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 BHLHE22Q8NFJ8 381 aaPredicted RBP15.64■□□□□ 0.09
VIM-205ENST00000485947 OR51I1Q9H343 314 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 GORASP2Q9H8Y8 452 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 A4GALTQ9NPC4 353 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 USP22Q9UPT9 525 aa15.64■□□□□ 0.09
VIM-205ENST00000485947 POLQO75417 2590 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 TMEM247A6NEH6 219 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 TTC36A6NLP5 189 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 ACOT7O00154 380 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 WWP2O00308 870 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 CXCR6O00574 342 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 PRRG2O14669 202 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 TFECO14948 347 aaPredicted RBP15.63■□□□□ 0.09
VIM-205ENST00000485947 MGRN1O60291 552 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 CBX7O95931 251 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 CNR1P21554 472 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 SOX3P41225 446 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 SMSP52788 366 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 RIPK1Q13546 671 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 CCNIQ14094 377 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 ADRM1Q16186 407 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 INTS11Q5TA45 600 aaKnown RBP15.63■□□□□ 0.09
VIM-205ENST00000485947 MFSD12Q6NUT3 480 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 TNFAIP8L2Q6P589 184 aaPredicted RBP15.63■□□□□ 0.09
VIM-205ENST00000485947 IL20RBQ6UXL0 311 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 DGAT2L6Q6ZPD8 337 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 SLC29A4Q7RTT9 530 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 MDGA2Q7Z553 956 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 CDRT4Q8N9R6 151 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 OR7G1Q8NGA0 311 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 PHF10Q8WUB8 498 aaKnown RBP15.63■□□□□ 0.09
VIM-205ENST00000485947 STMN2Q93045 179 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 TP53INP1Q96A56 240 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 NSMCE2Q96MF7 247 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 FAM173AQ9BQD7 235 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 SERHL2Q9H4I8 314 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 PLSCR2Q9NRY7 297 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 GIN1Q9NXP7 522 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 P2RX2Q9UBL9 471 aa15.63■□□□□ 0.09
VIM-205ENST00000485947 HMGN4O00479 90 aa15.62■□□□□ 0.09
VIM-205ENST00000485947 FKBP6O75344 327 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms