RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 MAL2Q969L2 176 aa11.2□□□□□ -0.62
TRA2B-213ENST00000485530 PNPLA2Q96AD5 504 aa11.2□□□□□ -0.62
TRA2B-213ENST00000485530 GPATCH1Q9BRR8 931 aaKnown RBP11.2□□□□□ -0.62
TRA2B-213ENST00000485530 ANGPTL4Q9BY76 406 aa11.2□□□□□ -0.62
TRA2B-213ENST00000485530 RUBCNLQ9H714 662 aa11.2□□□□□ -0.62
TRA2B-213ENST00000485530 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-213ENST00000485530 USP22Q9UPT9 525 aa11.2□□□□□ -0.62
TRA2B-213ENST00000485530 PCDHGB6Q9Y5F9 930 aa11.2□□□□□ -0.62
TRA2B-213ENST00000485530 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
TRA2B-213ENST00000485530 PRRC2CQ9Y520 2896 aaKnown RBP11.2□□□□□ -0.62
TRA2B-213ENST00000485530 POLQO75417 2590 aa11.2□□□□□ -0.62
TRA2B-213ENST00000485530 NPIPA5A0A0B4J1W7 369 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 ANKRD33BA6NCL7 494 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 WIPF3A6NGB9 483 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 DUXAA6NLW8 204 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 BBIP1A8MTZ0 92 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 NPIPA7E9PJI5 369 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 ASNA1O43681 348 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 PEX1O43933 1283 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 ABCB7O75027 752 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 TRIM3O75382 744 aaPredicted RBP11.19□□□□□ -0.62
TRA2B-213ENST00000485530 UTS2O95399 124 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 CBX6O95503 412 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 NPPAP01160 153 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 CHRM4P08173 479 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 KRT16P08779 473 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 NPIPA8P0DM63 369 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 CD46P15529 392 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 SLC6A2P23975 617 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 DNASE1L1P49184 302 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 PMP22Q01453 160 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 MRPL49Q13405 166 aaKnown RBP11.19□□□□□ -0.62
TRA2B-213ENST00000485530 KRT72Q14CN4 511 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 MAPK14Q16539 360 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRA2B-213ENST00000485530 MMEL1Q495T6 779 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 PRR30Q53SZ7 412 aaPredicted RBP11.19□□□□□ -0.62
TRA2B-213ENST00000485530 MARCH3Q86UD3 253 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 FBXW8Q8N3Y1 598 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 CISD2Q8N5K1 135 aaKnown RBP11.19□□□□□ -0.62
TRA2B-213ENST00000485530 DNAJB8Q8NHS0 232 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 ROPN1LQ96C74 230 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 CMTM5Q96DZ9 223 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 KLHDC3Q9BQ90 382 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 SAP130Q9H0E3 1048 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 KAT8Q9H7Z6 458 aaKnown RBP11.19□□□□□ -0.62
TRA2B-213ENST00000485530 EFCAB1Q9HAE3 211 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 GALNT9Q9HCQ5 603 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 TIMMDC1Q9NPL8 285 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 CMTM6Q9NX76 183 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 CNIH4Q9P003 139 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 MKLN1Q9UL63 735 aa11.19□□□□□ -0.62
TRA2B-213ENST00000485530 ZFHX3Q15911 3703 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 GCM2O75603 506 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 SOX30O94993 753 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 H6PDO95479 791 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 LDLRP01130 860 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 RFPL3SP0C7P2 107 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 TBXA2RP21731 343 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 IL12BP29460 328 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 RFC3P40938 356 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 KHKP50053 298 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 RNF144AP50876 292 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 DSTNP60981 165 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 PSPHP78330 225 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 CHRNEQ04844 493 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 EIF2S3LQ2VIR3 472 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 KLHL26Q53HC5 615 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 TYW3Q6IPR3 259 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 RPUSD3Q6P087 351 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 TMEM81Q6P7N7 255 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 FRRS1Q6ZNA5 592 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 MTERF4Q7Z6M4 381 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 HMGN2P46Q86SG4 172 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 CALHM3Q86XJ0 350 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 PTOV1Q86YD1 416 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 SLC15A3Q8IY34 581 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 DND1Q8IYX4 353 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 WDSUB1Q8N9V3 476 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 POGLUT1Q8NBL1 392 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 PCYOX1LQ8NBM8 494 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 TMEM125Q96AQ2 219 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 ZNF583Q96ND8 569 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 FRMD6Q96NE9 622 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 SECISBP2Q96T21 854 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 THUMPD3Q9BV44 507 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 ZNF350Q9GZX5 532 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 QRSL1Q9H0R6 528 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 SLC38A1Q9H2H9 487 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 PIF1Q9H611 641 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 SACM1LQ9NTJ5 587 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 RYDENQ9NUL5 291 aaKnown RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 TUBA8Q9NY65 449 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-213ENST00000485530 TAGLN3Q9UI15 199 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 PCDHGB3Q9Y5G1 929 aa11.18□□□□□ -0.62
TRA2B-213ENST00000485530 CSMD2Q7Z408 3487 aa11.17□□□□□ -0.62
TRA2B-213ENST00000485530 LRRC3CA6NJW4 275 aa11.17□□□□□ -0.62
TRA2B-213ENST00000485530 TP53I11O14683 189 aa11.17□□□□□ -0.62
TRA2B-213ENST00000485530 BCAS1O75363 584 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms