RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 ZNF175Q9Y473 711 aa18.18■□□□□ 0.5
ACTB-212ENST00000484841 SPG11Q96JI7 2443 aa18.18■□□□□ 0.5
ACTB-212ENST00000484841 PRRC2AP48634 2157 aaKnown RBP18.17■□□□□ 0.5
ACTB-212ENST00000484841 TLDC2A0PJX2 215 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 GXYLT2A0PJZ3 443 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 NDUFB5O43674 189 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 LINC00032P0C843 101 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 CD79BP40259 229 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 ASMTP46597 345 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 SUCLG1P53597 346 aaKnown RBP18.17■□□□□ 0.5
ACTB-212ENST00000484841 ADAM8P78325 824 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 FAM27E3Q08E93 113 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 GRAMD1BQ3KR37 738 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 GALNTL6Q49A17 601 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 VWA1Q6PCB0 445 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 R3HCC1LQ7Z5L2 792 aaKnown RBP18.17■□□□□ 0.5
ACTB-212ENST00000484841 FIG4Q92562 907 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 ZNF764Q96H86 408 aaPredicted RBP18.17■□□□□ 0.5
ACTB-212ENST00000484841 MS4A4EQ96PG1 132 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 EML4Q9HC35 981 aaKnown RBP18.17■□□□□ 0.5
ACTB-212ENST00000484841 TNFRSF12AQ9NP84 129 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 PROCRQ9UNN8 238 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 TESMINQ9Y4I5 508 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 CCL27Q9Y4X3 112 aa18.17■□□□□ 0.5
ACTB-212ENST00000484841 ANKHD1Q8IWZ3 2542 aaKnown RBP18.16■□□□□ 0.5
ACTB-212ENST00000484841 B4DXG7 233 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 NPIPB8E9PQR5 432 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 EMC8O43402 210 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 PLGP00747 810 aaPredicted RBP18.16■□□□□ 0.5
ACTB-212ENST00000484841 ALOX5P09917 674 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 SDC1P18827 310 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 ZNF41P51814 821 aaPredicted RBP18.16■□□□□ 0.5
ACTB-212ENST00000484841 CLDN15P56746 228 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 BTLAQ7Z6A9 289 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 OR6Y1Q8NGX8 325 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 FNDC9Q8TBE3 224 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.16■□□□□ 0.53e-8■■■■■ 63.7
ACTB-212ENST00000484841 JADE3Q92613 823 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 CHMP6Q96FZ7 201 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 GATA5Q9BWX5 397 aaPredicted RBP18.16■□□□□ 0.5
ACTB-212ENST00000484841 RTN4RQ9BZR6 473 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 OPN3Q9H1Y3 402 aaPredicted RBP18.16■□□□□ 0.5
ACTB-212ENST00000484841 RNF122Q9H9V4 155 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 BEX4Q9NWD9 120 aaPredicted RBP18.16■□□□□ 0.5
ACTB-212ENST00000484841 KLHL28Q9NXS3 571 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 VDAC3Q9Y277 283 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 PTGDR2Q9Y5Y4 395 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 PCNX3Q9H6A9 2034 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 C2CD3Q4AC94 2353 aa18.16■□□□□ 0.5
ACTB-212ENST00000484841 TMEM114B3SHH9 223 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 H0YC42 278 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 SCDO00767 359 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 EIF1AYO14602 144 aaKnown RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 TBX19O60806 448 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 NKX2-2O95096 273 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 FOSL1P15407 271 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 MAPK1P28482 360 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 RPL3P39023 403 aaKnown RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 EIF1AXP47813 144 aaKnown RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 SERPINB4P48594 390 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 PCYT1AP49585 367 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 PRIM2P49643 509 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 TPD52P55327 224 aaPredicted RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 CLDN20P56880 219 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 OCRLQ01968 901 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 SLC18A2Q05940 514 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 RFTN2Q52LD8 501 aaPredicted RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 KANK2Q63ZY3 851 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 ZCCHC12Q6PEW1 402 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 RNF165Q6ZSG1 346 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 Q6ZSR9 355 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 EXOC3L1Q86VI1 746 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 WDR75Q8IWA0 830 aaKnown RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 CLHC1Q8NHS4 586 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 MTERF3Q96E29 417 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 WFIKKN1Q96NZ8 548 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 FANCFQ9NPI8 374 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 ACSS1Q9NUB1 689 aaPredicted RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 PAQR5Q9NXK6 330 aaPredicted RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 C6orf203Q9P0P8 240 aaPredicted RBP18.15■□□□□ 0.5
ACTB-212ENST00000484841 BAIAP2L1Q9UHR4 511 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 EMC9Q9Y3B6 208 aa18.15■□□□□ 0.5
ACTB-212ENST00000484841 A0A087WZY1 265 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 IGLV3-32A0A0A0MS00 114 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 C16orf97H3BN30 126 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 SYNGR4O95473 234 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 OXSR1O95747 527 aaPredicted RBP18.14■□□□□ 0.49
ACTB-212ENST00000484841 HSPA4LO95757 839 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 CD8BP10966 210 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 ZNF17P17021 662 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 HPCAL1P37235 193 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 KIR2DL2P43627 348 aaPredicted RBP18.14■□□□□ 0.49
ACTB-212ENST00000484841 CTBP2P56545 445 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 PCLAFQ15004 111 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 FIGNL1Q6PIW4 674 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 LRIG3Q6UXM1 1119 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 GALNT10Q86SR1 603 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 MISPQ8IVT2 679 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 METTL25Q8N6Q8 603 aa18.14■□□□□ 0.49
ACTB-212ENST00000484841 COX18Q8N8Q8 333 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms