RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 OR2M3Q8NG83 312 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 OR5D16Q8NGK9 328 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 OR4C3Q8NH37 302 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 SSC4DQ8WTU2 575 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 TSPEARQ8WU66 669 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 PHF10Q8WUB8 498 aaKnown RBP14.47□□□□□ -0.09
UPF3A-208ENST00000484246 GTF2H4Q92759 462 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 SARAFQ96BY9 339 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 SPDL1Q96EA4 605 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 TBL1XR1Q9BZK7 514 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 RTN4RQ9BZR6 473 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 NMUR2Q9GZQ4 415 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 HOXD1Q9GZZ0 328 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 SLC6A15Q9H2J7 730 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 OR51I1Q9H343 314 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 POLE3Q9NRF9 147 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 EXD2Q9NVH0 621 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 PPP4R1LQ9P1A2 415 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 SPRR3Q9UBC9 169 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 KCNE3Q9Y6H6 103 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 RP1L1Q8IWN7 2480 aaPredicted RBP14.47□□□□□ -0.09
UPF3A-208ENST00000484246 TRGV8A0A0C4DH27 118 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 E9PLN8 166 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 LRRTM2O43300 516 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 SCO2O43819 266 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 KRT75O95678 551 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 VIMP08670 466 aaKnown RBP14.46□□□□□ -0.09
UPF3A-208ENST00000484246 ATP6V1C1P21283 382 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 CHI3L1P36222 383 aaPredicted RBP14.46□□□□□ -0.09
UPF3A-208ENST00000484246 RFX3P48380 749 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 C17orf67Q0P5P2 114 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 LRIF1Q5T3J3 769 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 CD163Q86VB7 1156 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 DOLPP1Q86YN1 238 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 FAM83FQ8NEG4 500 aaPredicted RBP14.46□□□□□ -0.09
UPF3A-208ENST00000484246 ZFP90Q8TF47 636 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 VPS33AQ96AX1 596 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 THOC1Q96FV9 657 aaKnown RBP14.46□□□□□ -0.09
UPF3A-208ENST00000484246 CHMP6Q96FZ7 201 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 SDF2Q99470 211 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 VKORC1Q9BQB6 163 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 TMEM120AQ9BXJ8 343 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 TP63Q9H3D4 680 aaPredicted RBP14.46□□□□□ -0.09
UPF3A-208ENST00000484246 FBXO34Q9NWN3 711 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 TINAGQ9UJW2 476 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 FBXL2Q9UKC9 423 aa14.46□□□□□ -0.09
UPF3A-208ENST00000484246 PRRC2CQ9Y520 2896 aaKnown RBP14.46□□□□□ -0.1
UPF3A-208ENST00000484246 CROCCQ5TZA2 2017 aa14.46□□□□□ -0.1
UPF3A-208ENST00000484246 A0A096LPI6 279 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 SCDO00767 359 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 KIAA0513O60268 411 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 PDE9AO76083 593 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 ANGPTL1O95841 491 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 CAPN3P20807 821 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 MSX1P28360 303 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 DCTP40126 519 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 MVDP53602 400 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 ATP12AP54707 1039 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 DSCR4P56555 118 aaPredicted RBP14.45□□□□□ -0.1
UPF3A-208ENST00000484246 CRYZQ08257 329 aaKnown RBP14.45□□□□□ -0.1
UPF3A-208ENST00000484246 FUT5Q11128 374 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 KLHL26Q53HC5 615 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 EMC4Q5J8M3 183 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 ATAD3BQ5T9A4 648 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 ZNF621Q6ZSS3 439 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 MTERF4Q7Z6M4 381 aaKnown RBP14.45□□□□□ -0.1
UPF3A-208ENST00000484246 RNF130Q86XS8 419 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 ZNF527Q8NB42 609 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 OR4K17Q8NGC6 315 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 DMRTA2Q96SC8 542 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 PAIP1Q9H074 479 aaKnown RBP14.45□□□□□ -0.1
UPF3A-208ENST00000484246 SAP130Q9H0E3 1048 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 LDAHQ9H6V9 325 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 SLC6A13Q9NSD5 602 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 CCDC167Q9P0B6 97 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 KLHL14Q9P2G3 628 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 SUCOQ9UBS9 1254 aaKnown RBP14.45□□□□□ -0.1
UPF3A-208ENST00000484246 LIPT1Q9Y234 373 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 MEMO1Q9Y316 297 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 ESPL1Q14674 2120 aa14.45□□□□□ -0.1
UPF3A-208ENST00000484246 A0A1W2PP18 115 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 FIGNL2A6NMB9 653 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 HMGN4O00479 90 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 NR5A2O00482 541 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 NDUFB5O43674 189 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 WDR1O75083 606 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 STX11O75558 287 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 ACTL6AO96019 429 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 GSNP06396 782 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 TPOP07202 933 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 HOXD4P09016 255 aaPredicted RBP14.44□□□□□ -0.1
UPF3A-208ENST00000484246 RNF224P0DH78 156 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 PTGER4P35408 488 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 ZNF141Q15928 474 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 FLYWCH1Q4VC44 716 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 AGKQ53H12 422 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 EIPR1Q53HC9 387 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 VASNQ6EMK4 673 aa14.44□□□□□ -0.1
UPF3A-208ENST00000484246 TNFAIP8L2Q6P589 184 aaPredicted RBP14.44□□□□□ -0.1
UPF3A-208ENST00000484246 RPTNQ6XPR3 784 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms