RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TRAF4Q9BUZ4 470 aaPredicted RBP11.47□□□□□ -0.57
UBR4-213ENST00000483922 TRIM2Q9C040 744 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 STMN4Q9H169 189 aaPredicted RBP11.47□□□□□ -0.57
UBR4-213ENST00000483922 OR10A4Q9H209 315 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 VPS11Q9H270 941 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 PFDN4Q9NQP4 134 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 SDHAF3Q9NRP4 125 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 FBXO34Q9NWN3 711 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 FAM120CQ9NX05 1096 aaKnown RBP11.47□□□□□ -0.57
UBR4-213ENST00000483922 TAS2R9Q9NYW1 312 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 XPR1Q9UBH6 696 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 OR10H1Q9Y4A9 318 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 RNF115Q9Y4L5 304 aa11.47□□□□□ -0.57
UBR4-213ENST00000483922 ALPK2Q86TB3 2170 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 FAM187AA6NFU0 413 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 ZNF814B7Z6K7 855 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 TNFSF11O14788 317 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 CLOCKO15516 846 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 ESRRBO95718 433 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 ANGPTL1O95841 491 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 FAM157CP0CG43 387 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 FCGR2AP12318 317 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 AGTR1P30556 359 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 STX2P32856 288 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 HTR6P50406 440 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 CTBP2P56545 445 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 PRR5P85299 388 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 CSTF3Q12996 717 aaKnown RBP11.46□□□□□ -0.57
UBR4-213ENST00000483922 CALCOCO2Q13137 446 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 NAB1Q13506 487 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 ERCC6LQ2NKX8 1250 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 GRAMD1BQ3KR37 738 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 FIGNL1Q6PIW4 674 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 TMEM107Q6UX40 140 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 CCDC91Q7Z6B0 441 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 EXOC3L1Q86VI1 746 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 CCDC25Q86WR0 208 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 ARIH2OSQ8N7S6 290 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 OR4C3Q8NH37 302 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.46□□□□□ -0.57
UBR4-213ENST00000483922 ROBO4Q8WZ75 1007 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 FBXW5Q969U6 566 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 ZNF524Q96C55 264 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 C1QTNF3Q9BXJ4 246 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 PRRG4Q9BZD6 226 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 ACPTQ9BZG2 426 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 PTGES2Q9H7Z7 377 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 ABCG2Q9UNQ0 655 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 C19orf53Q9UNZ5 99 aaPredicted RBP11.46□□□□□ -0.57
UBR4-213ENST00000483922 B3GALT5Q9Y2C3 310 aa11.46□□□□□ -0.57
UBR4-213ENST00000483922 YLPM1P49750 1951 aaKnown RBP11.46□□□□□ -0.58
UBR4-213ENST00000483922 A0A087WV62 115 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 SHISA9B4DS77 424 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 ZSCAN12O43309 604 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 SSX4O60224 188 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 PCDH7O60245 1069 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 UTS2O95399 124 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 PLGP00747 810 aaPredicted RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 JUNP05412 331 aaKnown RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 CD3EP07766 207 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 EDNRAP25101 427 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 ADH6P28332 368 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 MAP3K8P41279 467 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 PSPHP78330 225 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 MRPS22P82650 360 aaKnown RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 BSPH1Q075Z2 132 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 C17orf67Q0P5P2 114 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 ZNF155Q12901 538 aaPredicted RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 SFRP5Q5T4F7 317 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 KLC3Q6P597 504 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 CDYL2Q8N8U2 506 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 OR2V1Q8NHB1 315 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 PIWIL2Q8TC59 973 aaKnown RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 PIK3R3Q92569 461 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 SLC9A6Q92581 669 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 GTPBP3Q969Y2 492 aaKnown RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 DTNBP1Q96EV8 351 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 LMF2Q9BU23 707 aaKnown RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 GLIPR2Q9H4G4 154 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 TMEM185BQ9H7F4 350 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 ING1Q9UK53 422 aaPredicted RBP11.45□□□□□ -0.58
UBR4-213ENST00000483922 SNX6Q9UNH7 406 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 CADP27708 2225 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 FREM1Q5H8C1 2179 aa11.45□□□□□ -0.58
UBR4-213ENST00000483922 A8MT66 165 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 OTCP00480 354 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 RBP1P09455 135 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 MPIP34949 423 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 RFX3P48380 749 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 SERPINB8P50452 374 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 C21orf58P58505 322 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 GNG11P61952 73 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 RAC1P63000 192 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 IRX1P78414 480 aaPredicted RBP11.44□□□□□ -0.58
UBR4-213ENST00000483922 C2orf54Q08AI8 447 aa11.44□□□□□ -0.58
UBR4-213ENST00000483922 UAP1Q16222 522 aaPredicted RBP11.44□□□□□ -0.58
UBR4-213ENST00000483922 DECR1Q16698 335 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms