RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ART3Q13508 389 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 GANABQ14697 944 aaKnown RBP16.37■□□□□ 0.21
HDAC6-225ENST00000483506 SAXO2Q658L1 398 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 RTL6Q6ICC9 239 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 FIGNL1Q6PIW4 674 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 APOOLQ6UXV4 268 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 MRGPRGQ86SM5 289 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 OR2M3Q8NG83 312 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 OR5M9Q8NGP3 310 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 OR4C3Q8NH37 302 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 NEURL3Q96EH8 262 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 OTUB1Q96FW1 271 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-225ENST00000483506 OR7D2Q96RA2 312 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 TIMP4Q99727 224 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 TBL1XR1Q9BZK7 514 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 UBQLN4Q9NRR5 601 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 FBXO34Q9NWN3 711 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 TNFRSF10DQ9UBN6 386 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 FAM215AQ9Y5M1 114 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 KCNE3Q9Y6H6 103 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 C15orf38-AP3S2A0A0A6YYH1 394 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 A0A1W2PQD3 144 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 DUXAA6NLW8 204 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 C17orf51A8MQB3 221 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 C9JVG2 144 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 POLR3GO15318 223 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-225ENST00000483506 ACTL6AO96019 429 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 AK1P00568 194 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 GABRA1P14867 456 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 BMP7P18075 431 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 GFRA1P56159 465 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 DSCR4P56555 118 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-225ENST00000483506 TOMM20Q15388 145 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 WIPI1Q5MNZ9 446 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-225ENST00000483506 DCST2Q5T1A1 773 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 CCNJQ5T5M9 372 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 OR5M10Q6IEU7 315 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 MSANTD1Q6ZTZ1 278 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 NCCRP1Q6ZVX7 275 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-225ENST00000483506 YRDCQ86U90 279 aaKnown RBP16.36■□□□□ 0.21
HDAC6-225ENST00000483506 MARCH3Q86UD3 253 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 MIER2Q8N344 545 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 CHDHQ8NE62 594 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-225ENST00000483506 SLC35G5Q96KT7 338 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 MARK4Q96L34 752 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 OR52E6Q96RD3 313 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 EBF4Q9BQW3 602 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 UGT2B28Q9BY64 529 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 SLC6A5Q9Y345 797 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 KLF2Q9Y5W3 355 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-225ENST00000483506 UNC79Q9P2D8 2635 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 MED12Q93074 2177 aa16.36■□□□□ 0.21
HDAC6-225ENST00000483506 UQCRHLA0A096LP55 91 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 A1L4Q6 167 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 NPIPB9F8W1W9 429 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 ZIC3O60481 467 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 CPSF4O95639 269 aaKnown RBP16.35■□□□□ 0.21
HDAC6-225ENST00000483506 ANGPTL1O95841 491 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 GUSBP08236 651 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 MATN1P21941 496 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 DPP4P27487 766 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 AQP5P55064 265 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 RPS26P62854 115 aaKnown RBP16.35■□□□□ 0.21
HDAC6-225ENST00000483506 IRX1P78414 480 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-225ENST00000483506 C17orf67Q0P5P2 114 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 AP1ARQ63HQ0 302 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 ZNF585AQ6P3V2 769 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 B3GNT6Q6ZMB0 384 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 GALNT10Q86SR1 603 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 MISPQ8IVT2 679 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 ULK2Q8IYT8 1036 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 CLEC4FQ8N1N0 589 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 RPRMLQ8N4K4 120 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 OR4K17Q8NGC6 315 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 OR5D16Q8NGK9 328 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 DUSP19Q8WTR2 217 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 ABTB1Q969K4 478 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-225ENST00000483506 CHMP6Q96FZ7 201 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 HOXD1Q9GZZ0 328 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 TAS2R10Q9NYW0 307 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 CACNA1CQ13936 2221 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 ARHGAP21Q5T5U3 1957 aa16.35■□□□□ 0.21
HDAC6-225ENST00000483506 FAM234BA2RU67 622 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 AHRRA9YTQ3 701 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 EDF1O60869 148 aaKnown RBP16.34■□□□□ 0.21
HDAC6-225ENST00000483506 AGR2O95994 175 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 GCKP35557 465 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 TXNL4AP83876 142 aaKnown RBP16.34■□□□□ 0.21
HDAC6-225ENST00000483506 GLYR1Q49A26 553 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-225ENST00000483506 DCST1Q5T197 706 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 C1orf185Q5T7R7 199 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 HEPHL1Q6MZM0 1159 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 IFNEQ86WN2 208 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 PM20D2Q8IYS1 436 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 TRIML2Q8N7C3 387 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 OR9I1Q8NGQ6 314 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 OR14L1PQ8NHC6 308 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 C1GALT1C1Q96EU7 318 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 WDYHV1Q96HA8 205 aa16.34■□□□□ 0.21
HDAC6-225ENST00000483506 PANX1Q96RD7 426 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms