RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 DYNLL1P63167 89 aaKnown RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 DEFB103AP81534 67 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 BEX3Q00994 111 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 CEBPEQ15744 281 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 AGKQ53H12 422 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 CAVIN4Q5BKX8 364 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 LDLRAP1Q5SW96 308 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 ZNF774Q6NX45 483 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 AFTPHQ6ULP2 937 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 Q6ZRP5 223 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 SLC22A16Q86VW1 577 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 MISPQ8IVT2 679 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 OR4N5Q8IXE1 308 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 DQX1Q8TE96 717 aaKnown RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 PCNPQ8WW12 178 aaKnown RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 ARNTL2Q8WYA1 636 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 GTF3AQ92664 365 aaKnown RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 SYAP1Q96A49 352 aaPredicted RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 CNRIP1Q96F85 164 aaPredicted RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 C16orf58Q96GQ5 468 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 ANP32EQ9BTT0 268 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 RPAP3Q9H6T3 665 aaPredicted RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 DCTPP1Q9H773 170 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 ROPN1Q9HAT0 212 aaPredicted RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 VAT1LQ9HCJ6 419 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 EIF3KQ9UBQ5 218 aaKnown RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 IL20RAQ9UHF4 553 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 ZNF490Q9ULM2 529 aaPredicted RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 SLC9A8Q9Y2E8 581 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 MRPS18CQ9Y3D5 142 aaKnown RBP3.04□□□□□ -1.92
GTF3A-207ENST00000482655 U3KQV3 271 aa3.04□□□□□ -1.92
GTF3A-207ENST00000482655 NAV1Q8NEY1 1877 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 ELP1O95163 1332 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 MEX3AA1L020 520 aaKnown RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 SH3PXD2BA1X283 911 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 SRRM4A7MD48 611 aaKnown RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 SH2D1BO14796 132 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 CLDN3O15551 220 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 TLX2O43763 284 aaPredicted RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 TSPAN2O60636 221 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 PTBP3O95758 552 aaKnown RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 IFNB1P01574 187 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 FCER2P06734 321 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 ASNSP08243 561 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 RRASP10301 218 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 CD1DP15813 335 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 TNNI3P19429 210 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 CALML3P27482 149 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 ID1P41134 155 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 SLC1A6P48664 564 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 NPY2RP49146 381 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 NDST1P52848 882 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 RPL27P61353 136 aaKnown RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 GSTO1P78417 241 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 KLF5Q13887 457 aaPredicted RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 FASTKQ14296 549 aaKnown RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 MLF2Q15773 248 aaPredicted RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 CLPPQ16740 277 aaPredicted RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 HAGHQ16775 308 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 UPP1Q16831 310 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 MS4A18Q3C1V0 323 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 MOGAT2Q3SYC2 334 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 DCAF12Q5T6F0 453 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 CXCL17Q6UXB2 119 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 GPRIN3Q6ZVF9 776 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 GOLGA7Q7Z5G4 137 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 ADGRD2Q7Z7M1 963 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 GPBP1Q86WP2 473 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 WDR49Q8IV35 697 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 PYROXD2Q8N2H3 581 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 ZBTB44Q8NCP5 570 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 NCLNQ969V3 563 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 PNPLA2Q96AD5 504 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 ATXN7L3BQ96GX2 97 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 AGAP4Q96P64 663 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 TNFRSF13CQ96RJ3 184 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 NDUFAF3Q9BU61 184 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 WRAP53Q9BUR4 548 aaKnown RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 FICDQ9BVA6 458 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 STRADBQ9C0K7 418 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 LIN28AQ9H9Z2 209 aaKnown RBP3.03□□□□□ -1.92
GTF3A-207ENST00000482655 SLC25A19Q9HC21 320 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 LHX3Q9UBR4 397 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 MGAT4BQ9UQ53 548 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 SLC6A5Q9Y345 797 aa3.03□□□□□ -1.92
GTF3A-207ENST00000482655 CACNA1AO00555 2505 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 TP53BP1Q12888 1972 aaPredicted RBP3.02□□□□□ -1.93
GTF3A-207ENST00000482655 SCN10AQ9Y5Y9 1956 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 A0A087WZY1 265 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 FAM230AA0A1W2PPH8 454 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 LOC390937A0A1W2PQ73 354 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 ANKRD30BLA7E2S9 258 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 MPTX1A8MV57 137 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 FBP2O00757 339 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 SOCS3O14543 225 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 MBTPS2O43462 519 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 DUSP11O75319 330 aaKnown RBP3.02□□□□□ -1.93
GTF3A-207ENST00000482655 SRSF10O75494 262 aaKnown RBP3.02□□□□□ -1.93
GTF3A-207ENST00000482655 TOM1L1O75674 476 aa3.02□□□□□ -1.93
GTF3A-207ENST00000482655 FHP07954 510 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms