RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 THUMPD1Q9NXG2 353 aaKnown RBP18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 FLRT3Q9NZU0 649 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 CHCHD2Q9Y6H1 151 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 EML6Q6ZMW3 1958 aa18.29■□□□□ 0.52
TRAPPC12-220ENST00000482645 TMEM247A6NEH6 219 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 C5orf58C9J3I9 102 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 CDK2AP1O14519 115 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ARPC2O15144 300 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SLC28A2O43868 658 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ABCB7O75027 752 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ICOSLGO75144 302 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 P04436 131 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SP1P08047 785 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 NR2F1P10589 423 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 PCGF2P35227 344 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 PNLIPRP2P54317 469 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 HPCAP84074 193 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 CDK6Q00534 326 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 EFR3AQ14156 821 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SYPL1Q16563 259 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ZNF630Q2M218 657 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 RPS26P11Q5JNZ5 115 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SLC6A19Q695T7 634 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SLC25A25Q6KCM7 469 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 Q6ZS92 163 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 NUP54Q7Z3B4 507 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 GALNTL5Q7Z4T8 443 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ANKFN1Q8N957 763 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 GOLM1Q8NBJ4 401 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 HGDQ93099 445 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 TMCO6Q96DC7 493 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 TMEM19Q96HH6 336 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 NODALQ96S42 347 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 METTL7AQ9H8H3 244 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SACM1LQ9NTJ5 587 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 POMPQ9Y244 141 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ANGPT4Q9Y264 503 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ZFYVE26Q68DK2 2539 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 IGSF10Q6WRI0 2623 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 NPIPA5A0A0B4J1W7 369 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 NPIPA7E9PJI5 369 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 CXCR6O00574 342 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ATXN7O15265 892 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 UTS2O95399 124 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 NPIPA8P0DM63 369 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 GGT1P19440 569 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 AQP1P29972 269 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 RPP38P78345 283 aaKnown RBP18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 RBBP4Q09028 425 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 FLOT2Q14254 428 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 TRIM25Q14258 630 aaKnown RBP18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 ARHGAP11BQ3KRB8 267 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 PLEKHN1Q494U1 663 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 FLYWCH1Q4VC44 716 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 TMEM178AQ8NBL3 297 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 PAQR8Q8TEZ7 354 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SLC38A5Q8WUX1 472 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SDF2Q99470 211 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 KLRF1Q9NZS2 232 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 MAGEL2Q9UJ55 1249 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SNX13Q9Y5W8 968 aa18.28■□□□□ 0.52
TRAPPC12-220ENST00000482645 SMG1Q96Q15 3661 aaKnown RBP18.27■□□□□ 0.52
TRAPPC12-220ENST00000482645 PRAMEF27A3QJZ7 478 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 NME2P1O60361 137 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 STAMBPO95630 424 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 AK1P00568 194 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 ATP6V1B2P21281 511 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 NME2P22392 152 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 MS4A2Q01362 244 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 NFATC3Q12968 1075 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 GPR68Q15743 365 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 HEPHL1Q6MZM0 1159 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 CYP2R1Q6VVX0 501 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 CHDHQ8NE62 594 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 FAM110BQ8TC76 370 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 SPPL2AQ8TCT8 520 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 RYDENQ9NUL5 291 aaKnown RBP18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 MKLN1Q9UL63 735 aa18.27■□□□□ 0.51
TRAPPC12-220ENST00000482645 SPTA1P02549 2419 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 A0A0G2JMM0 328 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 A0A1W2PPB8 328 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 A0A1W2PRS3 328 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 KIR3DP1A8MWS1 328 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 SCO2O43819 266 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 FCMRO60667 390 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 GMNNO75496 209 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 STX11O75558 287 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 H6PDO95479 791 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 CHRM4P08173 479 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 TFPTP0C1Z6 253 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 ERFP50548 548 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 RNF144AP50876 292 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 KLRB1Q12918 225 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 MAPK11Q15759 364 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 FXNQ16595 210 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 GRAMD1BQ3KR37 738 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 LRRC23Q53EV4 343 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 HMGN2P46Q86SG4 172 aa18.26■□□□□ 0.51
TRAPPC12-220ENST00000482645 DHFR2Q86XF0 187 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms