RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 OLIG3Q7RTU3 272 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 MARCH3Q86UD3 253 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 FJX1Q86VR8 437 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 FUNDC1Q8IVP5 155 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ZNF614Q8N883 585 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 OR4K17Q8NGC6 315 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 GOT1L1Q8NHS2 421 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 XAGE5Q8WWM1 108 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 STON2Q8WXE9 905 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 TMEM41AQ96HV5 264 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ZNF317Q96PQ6 595 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 RABEP2Q9H5N1 569 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 KLHL14Q9P2G3 628 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 DKKL1Q9UK85 242 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 FBXL2Q9UKC9 423 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ABCG2Q9UNQ0 655 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CELSR2Q9HCU4 2923 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ARHGAP21Q5T5U3 1957 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CACNA1CQ13936 2221 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 PHF3Q92576 2039 aaKnown RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 C15orf38-AP3S2A0A0A6YYH1 394 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 TRGV5A0A0B4J1U4 118 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 DUXAA6NLW8 204 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 NPIPA2E9PIF3 369 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 NPIPA3F8WFD2 350 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 SCDO00767 359 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 FADS1O60427 444 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 SEMA7AO75326 666 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ZIC2O95409 532 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 OXSR1O95747 527 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ANGPTL1O95841 491 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 PTPN6P29350 595 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 DCTP40126 519 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CRATP43155 626 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 SEC24CP53992 1094 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 GAS1P54826 345 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CASP6P55212 293 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 GNGT1P63211 74 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 HPCAP84074 193 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 UBAP2LQ14157 1087 aaKnown RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 GPR68Q15743 365 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 HYAL4Q2M3T9 481 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 COX20Q5RI15 118 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 EXOSC6Q5RKV6 272 aaKnown RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ATAD3BQ5T9A4 648 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ARHGAP11AQ6P4F7 1023 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CD163Q86VB7 1156 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 PLCZ1Q86YW0 608 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 WDSUB1Q8N9V3 476 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 FAM83FQ8NEG4 500 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 OR5M9Q8NGP3 310 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 OR4C3Q8NH37 302 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 OR14L1PQ8NHC6 308 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 C10orf82Q8WW14 230 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 GTF2H4Q92759 462 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 SH3YL1Q96HL8 342 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 RTN4RQ9BZR6 473 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 UBQLN3Q9H347 655 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ZNF385DQ9H6B1 395 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 EXD2Q9NVH0 621 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 PCDHB14Q9Y5E9 798 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 TACC2O95359 2948 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 DCHS2Q6V1P9 2916 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 HMGN4O00479 90 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 ANGPT2O15123 496 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 LRRTM2O43300 516 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 NDUFB5O43674 189 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 KRT75O95678 551 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 LSP1P33241 339 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 PTGS2P35354 604 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 IRX1P78414 480 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 FUT5Q11128 374 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 C3AR1Q16581 482 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 GPAT3Q53EU6 434 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 EIPR1Q53HC9 387 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 PAGE3Q5JUK9 113 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 WIPI1Q5MNZ9 446 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 APOOLQ6UXV4 268 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 TRILQ7L0X0 811 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 SPATA21Q7Z572 469 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 FGD2Q7Z6J4 655 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 HMGN2P46Q86SG4 172 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 YRDCQ86U90 279 aaKnown RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 CHERPQ8IWX8 916 aaKnown RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 TMCO5AQ8N6Q1 288 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 ZNF527Q8NB42 609 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 FAM110BQ8TC76 370 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 MIPOL1Q8TD10 442 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 ZFP90Q8TF47 636 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 DUSP19Q8WTR2 217 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 RNF138Q8WVD3 245 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 PAIP1Q9H074 479 aaKnown RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 NSRP1Q9H0G5 558 aaKnown RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 DSN1Q9H410 356 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 TPT1P8Q9HAU6 139 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 UBQLN4Q9NRR5 601 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 MED11Q9P086 117 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 SLAMF8Q9P0V8 285 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 SPRR3Q9UBC9 169 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms