RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 M0R296 226 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 SURF4O15260 269 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 HNRNPCP07910 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPRF-212ENST00000477970 NID1P14543 1247 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 WNT4P56705 351 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 RPS3AP61247 264 aaKnown RBP11.37□□□□□ -0.59
PTPRF-212ENST00000477970 TPBGQ13641 420 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 DCST2Q5T1A1 773 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 AADACL4Q5VUY2 407 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 LYSMD2Q8IV50 215 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 SEMA6CQ9H3T2 930 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 ANKRA2Q9H9E1 313 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 POMT2Q9UKY4 750 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 LYPD3O95274 346 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 MED26O95402 600 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 DGKEP52429 567 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 LSM11P83369 360 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPRF-212ENST00000477970 KRR1Q13601 381 aaKnown RBP11.37□□□□□ -0.59
PTPRF-212ENST00000477970 ZSWIM7Q19AV6 140 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 TMEM31Q5JXX7 168 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 RRM2BQ7LG56 351 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 DGLUCYQ7Z3D6 616 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 OOSP2Q86WS3 158 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 SLC43A2Q8N370 569 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 ZNF485Q8NCK3 441 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 ANKK1Q8NFD2 765 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 OR10G6Q8NH81 332 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 FAM46AQ96IP4 442 aaKnown RBP11.37□□□□□ -0.59
PTPRF-212ENST00000477970 CCDC32Q9BV29 185 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 KLHL3Q9UH77 587 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 ZNF223Q9UK11 482 aaPredicted RBP11.37□□□□□ -0.59
PTPRF-212ENST00000477970 IQCMA0A1B0GVH7 501 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 KRBA1A5PL33 1030 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 TRAPPC13A5PLN9 417 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 HMGN1P05114 100 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 MYL12AP19105 171 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 AVPR1BP47901 424 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 PGGHGQ32M88 737 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 NKAIN4Q8IVV8 208 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 CSNK1A1LQ8N752 337 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 ADAMTS18Q8TE60 1221 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 SLC37A2Q8TED4 501 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 PRSS27Q9BQR3 290 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 LMF2Q9BU23 707 aaKnown RBP11.37□□□□□ -0.59
PTPRF-212ENST00000477970 FN3KQ9H479 309 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 ARMC7Q9H6L4 198 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 RNF167Q9H6Y7 350 aa11.37□□□□□ -0.59
PTPRF-212ENST00000477970 MRPS2Q9Y399 296 aaKnown RBP11.37□□□□□ -0.59
PTPRF-212ENST00000477970 FGF17O60258 216 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 COQ9O75208 318 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 NKX2-2O95096 273 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 PTTG1O95997 202 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 IL1AP01583 271 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 SLC35E2P0CK97 266 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 MTNR1AP48039 350 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 MAP4K2Q12851 820 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 FZD2Q14332 565 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 TRMT12Q53H54 448 aaKnown RBP11.36□□□□□ -0.59
PTPRF-212ENST00000477970 ARMC4Q5T2S8 1044 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 GRAMD2AQ8IUY3 354 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 PARP16Q8N5Y8 322 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 SLC9A6Q92581 669 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 RNFT2Q96EX2 444 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 NEURL2Q9BR09 285 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 C6orf62Q9GZU0 229 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-212ENST00000477970 HRASLS2Q9NWW9 162 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 SSR3Q9UNL2 185 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 NINQ8N4C6 2090 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 CDHR4A6H8M9 788 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 BRINP1O60477 761 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 DNAJB6O75190 326 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 IGHA1P01876 353 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 ETV5P41161 510 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 ETV1P50549 477 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 BLKP51451 505 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 PSMD7P51665 324 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 SOWAHCQ53LP3 525 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-212ENST00000477970 NXNL2Q5VZ03 156 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 CD200R1LQ6Q8B3 271 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 ANKRD9Q96BM1 317 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-212ENST00000477970 COQ7Q99807 217 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 ASPNQ9BXN1 380 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 TMEM74BQ9NUR3 256 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 TECTAO75443 2155 aa11.36□□□□□ -0.59
PTPRF-212ENST00000477970 TRBV23OR9-2A0A075B6M9 112 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 CHURC1-FNTBB4DL54 471 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 CKMT1AP12532 417 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 GALP22466 123 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 IGLV3-21P80748 117 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-212ENST00000477970 PLK5Q496M5 336 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 BCDIN3DQ7Z5W3 292 aaKnown RBP11.35□□□□□ -0.59
PTPRF-212ENST00000477970 HMGN2P46Q86SG4 172 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 OR4Q3Q8NH05 313 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 CHCHD3Q9NX63 227 aaKnown RBP11.35□□□□□ -0.59
PTPRF-212ENST00000477970 TMEM5Q9Y2B1 443 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 SF3B6Q9Y3B4 125 aaKnown RBP11.35□□□□□ -0.59
PTPRF-212ENST00000477970 FRS3O43559 492 aa11.35□□□□□ -0.59
PTPRF-212ENST00000477970 HTR1FP30939 366 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms