RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 DDHD1Q8NEL9 900 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 OR1J1Q8NGS3 322 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 OR2Y1Q8NGV0 311 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 OR2AJ1Q8NGZ0 328 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 RNF128Q8TEB7 428 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 ZFAND2BQ8WV99 257 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 HSD17B8Q92506 261 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 EPSTI1Q96J88 318 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 ZYG11BQ9C0D3 744 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 TNMDQ9H2S6 317 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 LIME1Q9H400 295 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 OSGEPL1Q9H4B0 414 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 SUDS3Q9H7L9 328 aaPredicted RBP4.01□□□□□ -1.77
VPS50-214ENST00000477935 FANCEQ9HB96 536 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 RAB20Q9NX57 234 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 PSD3Q9NYI0 1048 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 OSGIN1Q9UJX0 560 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 PTRH2Q9Y3E5 179 aaKnown RBP4.01□□□□□ -1.77
VPS50-214ENST00000477935 INTS1Q8N201 2190 aaKnown RBP4.01□□□□□ -1.77
VPS50-214ENST00000477935 GTF3C1Q12789 2109 aa4□□□□□ -1.77
VPS50-214ENST00000477935 NBEAL2Q6ZNJ1 2754 aa4□□□□□ -1.77
VPS50-214ENST00000477935 IGHV5-51A0A0C4DH38 117 aa4□□□□□ -1.77
VPS50-214ENST00000477935 A0A1W2PQ67 120 aa4□□□□□ -1.77
VPS50-214ENST00000477935 PSMD11O00231 422 aa4□□□□□ -1.77
VPS50-214ENST00000477935 PDXKO00764 312 aa4□□□□□ -1.77
VPS50-214ENST00000477935 ADAMDEC1O15204 470 aa4□□□□□ -1.77
VPS50-214ENST00000477935 PHF1O43189 567 aaPredicted RBP4□□□□□ -1.77
VPS50-214ENST00000477935 XRCC3O43542 346 aa4□□□□□ -1.77
VPS50-214ENST00000477935 BUB1O43683 1085 aa4□□□□□ -1.77
VPS50-214ENST00000477935 KDELR3O43731 214 aa4□□□□□ -1.77
VPS50-214ENST00000477935 STX10O60499 249 aa4□□□□□ -1.77
VPS50-214ENST00000477935 PRAMEF11O60813 436 aa4□□□□□ -1.77
VPS50-214ENST00000477935 TSPAN9O75954 239 aa4□□□□□ -1.77
VPS50-214ENST00000477935 TOXO94900 526 aa4□□□□□ -1.77
VPS50-214ENST00000477935 EML2O95834 649 aa4□□□□□ -1.77
VPS50-214ENST00000477935 TSPAN12O95859 305 aa4□□□□□ -1.77
VPS50-214ENST00000477935 KRT13P13646 458 aa4□□□□□ -1.77
VPS50-214ENST00000477935 ZNF26P17031 533 aaPredicted RBP4□□□□□ -1.77
VPS50-214ENST00000477935 WNT5AP41221 380 aa4□□□□□ -1.77
VPS50-214ENST00000477935 GCLMP48507 274 aa4□□□□□ -1.77
VPS50-214ENST00000477935 CLNS1AP54105 237 aaKnown RBP4□□□□□ -1.77
VPS50-214ENST00000477935 RHOAP61586 193 aa4□□□□□ -1.77
VPS50-214ENST00000477935 UBE2IP63279 158 aaKnown RBP4□□□□□ -1.77
VPS50-214ENST00000477935 CACNG1Q06432 222 aa4□□□□□ -1.77
VPS50-214ENST00000477935 EPS8Q12929 822 aa4□□□□□ -1.77
VPS50-214ENST00000477935 NME3Q13232 169 aa4□□□□□ -1.77
VPS50-214ENST00000477935 PRKG2Q13237 762 aa4□□□□□ -1.77
VPS50-214ENST00000477935 CUL2Q13617 745 aa4□□□□□ -1.77
VPS50-214ENST00000477935 TOMM20Q15388 145 aa4□□□□□ -1.77
VPS50-214ENST00000477935 C1orf220Q5T0J3 134 aa4□□□□□ -1.77
VPS50-214ENST00000477935 DHRS7BQ6IAN0 325 aaPredicted RBP4□□□□□ -1.77
VPS50-214ENST00000477935 IRGCQ6NXR0 463 aa4□□□□□ -1.77
VPS50-214ENST00000477935 FIGLAQ6QHK4 219 aa4□□□□□ -1.77
VPS50-214ENST00000477935 FAM198BQ6UWH4 519 aa4□□□□□ -1.77
VPS50-214ENST00000477935 ZNF497Q6ZNH5 498 aa4□□□□□ -1.77
VPS50-214ENST00000477935 FAM92BQ6ZTR7 304 aa4□□□□□ -1.77
VPS50-214ENST00000477935 PCGF5Q86SE9 256 aa4□□□□□ -1.77
VPS50-214ENST00000477935 CDC20BQ86Y33 519 aa4□□□□□ -1.77
VPS50-214ENST00000477935 DNAAF5Q86Y56 855 aa4□□□□□ -1.77
VPS50-214ENST00000477935 NELFCDQ8IXH7 590 aa4□□□□□ -1.77
VPS50-214ENST00000477935 ZNF683Q8IZ20 524 aa4□□□□□ -1.77
VPS50-214ENST00000477935 LRRC75A-AS1Q8N1F1 130 aa4□□□□□ -1.77
VPS50-214ENST00000477935 PAPD5Q8NDF8 572 aaKnown RBP4□□□□□ -1.77
VPS50-214ENST00000477935 CATSPER1Q8NEC5 780 aa4□□□□□ -1.77
VPS50-214ENST00000477935 FBXL13Q8NEE6 735 aa4□□□□□ -1.77
VPS50-214ENST00000477935 NUS1Q96E22 293 aa4□□□□□ -1.77
VPS50-214ENST00000477935 EEF2KMTQ96G04 330 aa4□□□□□ -1.77
VPS50-214ENST00000477935 NSL1Q96IY1 281 aa4□□□□□ -1.77
VPS50-214ENST00000477935 ART5Q96L15 291 aa4□□□□□ -1.77
VPS50-214ENST00000477935 CDRT15Q96T59 188 aa4□□□□□ -1.77
VPS50-214ENST00000477935 SLC7A5P2Q9GIP4 190 aa4□□□□□ -1.77
VPS50-214ENST00000477935 VN1R1Q9GZP7 353 aa4□□□□□ -1.77
VPS50-214ENST00000477935 DPAGT1Q9H3H5 408 aa4□□□□□ -1.77
VPS50-214ENST00000477935 GPATCH2LQ9NWQ4 482 aa4□□□□□ -1.77
VPS50-214ENST00000477935 MRPS2Q9Y399 296 aaKnown RBP4□□□□□ -1.77
VPS50-214ENST00000477935 ZANQ9Y493 2812 aa4□□□□□ -1.77
VPS50-214ENST00000477935 ANK3Q12955 4377 aaKnown RBP4□□□□□ -1.77
VPS50-214ENST00000477935 IGKV3D-15A0A087WSY6 115 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 SYNJ2BP-COX16A0A087WUM0 186 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 LOC102723996A0A087X1L8 192 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 HYKKA2RU49 373 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 M0QYV0 167 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 VEGFDO43915 354 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 HSF2BPO75031 334 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 TRMUO75648 421 aaKnown RBP3.99□□□□□ -1.77
VPS50-214ENST00000477935 PIGNO95427 931 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 FAM157CP0CG43 387 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 ABOP16442 354 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 CYP2A7P20853 494 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 MMP11P24347 488 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 GABRA5P31644 462 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 GPR1P46091 355 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 CSNK1DP48730 415 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 CX3CL1P78423 397 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 RALGDSQ12967 914 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 TMEM187Q14656 261 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 PCLAFQ15004 111 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 ZFP69Q49AA0 526 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 IGSF11Q5DX21 431 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms