RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TUBBP07437 444 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 RBP1P09455 135 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 MPIP34949 423 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 SFTPDP35247 375 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF41P51814 821 aaPredicted RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 NUDT6P53370 316 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 PSMD4P55036 377 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 CDH13P55290 713 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 TRA2BP62995 288 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 SRSF2Q01130 221 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF844Q08AG5 666 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 ACSM2AQ08AH3 577 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 HEPACAMQ14CZ8 416 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 SPDYAQ5MJ70 313 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 TMEM201Q5SNT2 666 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 PDSS1Q5T2R2 415 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 ACSM2BQ68CK6 577 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 HBMQ6B0K9 141 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 LETMD1Q6P1Q0 360 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 FIGNL1Q6PIW4 674 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 GALNT10Q86SR1 603 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 GGNQ86UU5 652 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 SAMD14Q8IZD0 417 aaPredicted RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 PLD6Q8N2A8 252 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 METTL25Q8N6Q8 603 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 CDYL2Q8N8U2 506 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 BANPQ8N9N5 519 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 STEAP2Q8NFT2 490 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 ROBO4Q8WZ75 1007 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 SH3YL1Q96HL8 342 aaPredicted RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 RNF145Q96MT1 663 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF681Q96N22 645 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 KCNK17Q96T54 332 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 BEX2Q9BXY8 128 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 RTN4RQ9BZR6 473 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 HEATR1Q9H583 2144 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 BRF2Q9HAW0 419 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 SLC35C2Q9NQQ7 365 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 PLSCR4Q9NRQ2 329 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 DDX18Q9NVP1 670 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 FBXO34Q9NWN3 711 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 FAM120CQ9NX05 1096 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 VPS29Q9UBQ0 182 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 DMGDHQ9UI17 866 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 MCM8Q9UJA3 840 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 TMCO1Q9UM00 188 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 NFU1Q9UMS0 254 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 ABCG2Q9UNQ0 655 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 GPR52Q9Y2T5 361 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 UTP11Q9Y3A2 253 aaKnown RBP5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 SNX8Q9Y5X2 465 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 CUBNO60494 3623 aa5.97□□□□□ -1.45
RTFDC1-206ENST00000477485 CCDC189A1A4V9 331 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 FAM234BA2RU67 622 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 FAM187AA6NFU0 413 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 STX16-NPEPL1H3BU86 382 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 MANBAO00462 879 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 PPP6CO00743 305 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 UBFD1O14562 309 aaKnown RBP5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 STX16O14662 325 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 FADS1O60427 444 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 DLX3O60479 287 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 SUPT7LO94864 414 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 UTS2O95399 124 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 IL33O95760 270 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 NUDT14O95848 222 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 KRT6AP02538 564 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 KRT6BP04259 564 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 FAM157CP0CG43 387 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 HPGDP15428 266 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 CHN1P15882 459 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF16P17020 682 aaPredicted RBP5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 AGTR1P30556 359 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 NTSP30990 170 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 GABRA3P34903 492 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 GPC1P35052 558 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 PHBP35232 272 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 KRT6CP48668 564 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 CDH11P55287 796 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 PSG6Q00889 435 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 BSPH1Q075Z2 132 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 C17orf67Q0P5P2 114 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 C2orf80Q0P641 193 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 GUSBP1Q15486 140 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 TAB1Q15750 504 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 GRAMD1BQ3KR37 738 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF672Q499Z4 452 aaPredicted RBP5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 GGTA1PQ4G0N0 100 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 CYP27C1Q4G0S4 372 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 SPIN4Q56A73 249 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 NCMAPQ5T1S8 102 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 C6orf52Q5T4I8 152 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 GTF2IRD2BQ6EKJ0 949 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 METTL2BQ6P1Q9 378 aaKnown RBP5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 CLEC2AQ6UVW9 174 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 CYS1Q717R9 158 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 ATG4DQ86TL0 474 aaPredicted RBP5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 GTF2IRD2Q86UP8 949 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 MMGT1Q8N4V1 131 aa5.96□□□□□ -1.46
RTFDC1-206ENST00000477485 ATP6V1C2Q8NEY4 427 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms