RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 M1APQ8TC57 530 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 C16orf78Q8WTQ4 265 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 DDB2Q92466 427 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 RIT1Q92963 219 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 EXOSC8Q96B26 276 aaKnown RBP4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 TM4SF18Q96CE8 201 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 CHMP6Q96FZ7 201 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 VMP1Q96GC9 406 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 THOC3Q96J01 351 aaKnown RBP4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 ZNF354BQ96LW1 612 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 AGAP4Q96P64 663 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 TSSK3Q96PN8 268 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 SORT1Q99523 831 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 CCDC28BQ9BUN5 200 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 C1orf50Q9BV19 199 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 SLC25A23Q9BV35 468 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 CNPPD1Q9BV87 410 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 SORBS1Q9BX66 1292 aaKnown RBP4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 DEFB126Q9BYW3 111 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 BRINP2Q9C0B6 783 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 LHPPQ9H008 270 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 ZNF700Q9H0M5 742 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 ING2Q9H160 280 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 REEP4Q9H6H4 257 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 RMND5AQ9H871 391 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 AKIRIN1Q9H9L7 192 aaPredicted RBP4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 MEAF6Q9HAF1 191 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 CACYBPQ9HB71 228 aaKnown RBP4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 C3orf14Q9HBI5 128 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 ZNF160Q9HCG1 818 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 MYNNQ9NPC7 610 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 TCF7L2Q9NQB0 619 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 GPR83Q9NYM4 423 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 TAS2R9Q9NYW1 312 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 PRODH2Q9UF12 536 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 BCAP29Q9UHQ4 241 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 HAO1Q9UJM8 370 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 ZNF225Q9UK10 706 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 FBXL4Q9UKA2 621 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 MRTO4Q9UKD2 239 aaKnown RBP4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 ATG4BQ9Y4P1 393 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 MRPS18BQ9Y676 258 aaKnown RBP4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 HEATR5BQ9P2D3 2071 aa4.18□□□□□ -1.74
NSMCE4A-208ENST00000477289 MDC1Q14676 2089 aaKnown RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 LOC102723996A0A087X1L8 192 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 IGHV1-45A0A0A0MS14 117 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 A0A1W2PRB8 838 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 GMNCA6NCL1 334 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 TMEM247A6NEH6 219 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 SAGE2PA6NJ88 616 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 GLOD5A6NK44 160 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 A6NL46 340 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 TTC36A6NLP5 189 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 OR6C76A6NM76 312 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 LINC00473A8K010 186 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 A8MUI8 341 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 FAM227AF5H4B4 570 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 TMPRSS11DO60235 418 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 DPM1O60762 260 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 PRAMEF2O60811 474 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 CCDC22O60826 627 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 JRKO75564 520 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 SLC22A3O75751 556 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 KLF7O75840 302 aaPredicted RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 LRATO95237 230 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 ETHE1O95571 254 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 IL6P05231 212 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 SERPINA7P05543 415 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 UMODP07911 640 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 CHRM2P08172 466 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 CELA2AP08217 269 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 BCKDHAP12694 445 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 CPMP14384 443 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 PPP3CBP16298 524 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 MAOAP21397 527 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 EPHA3P29320 983 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 SOAT1P35610 550 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 FEN1P39748 380 aaKnown RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 STT3AP46977 705 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 TMED10P49755 219 aaKnown RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 ZNF81P51508 661 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 NCBP2P52298 156 aaKnown RBP eCLIP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 PSMD4P55036 377 aaKnown RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 HNRNPH2P55795 449 aaKnown RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 CLDN8P56748 225 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 DCAF7P61962 342 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 ARG2P78540 354 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 BTG2P78543 158 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 MRPS22P82650 360 aaKnown RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 RHAGQ02094 409 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 OC90Q02509 493 aaPredicted RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 ZNF267Q14586 743 aaPredicted RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 MEP1AQ16819 746 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 KIF26BQ2KJY2 2108 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 UGT3A2Q3SY77 523 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 MMEL1Q495T6 779 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 VPS26BQ4G0F5 336 aa4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 RFTN2Q52LD8 501 aaPredicted RBP4.17□□□□□ -1.74
NSMCE4A-208ENST00000477289 XKR7Q5GH72 579 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms