RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PDLIM3Q53GG5 364 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 ACER2Q5QJU3 275 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 DDI2Q5TDH0 399 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SLX4IPQ5VYV7 408 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 LIPJQ5W064 366 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CST9LP1Q5W188 147 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ADNP2Q6IQ32 1131 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ARMCX5Q6P1M9 558 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 LRRC8BQ6P9F7 803 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 DOK6Q6PKX4 331 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 WASH2PQ6VEQ5 465 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PIWIL4Q7Z3Z4 852 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 PEX26Q7Z412 305 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 P4HA3Q7Z4N8 544 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SETD3Q86TU7 594 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 RTN4RL2Q86UN3 420 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CDC20BQ86Y33 519 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 NRROSQ86YC3 692 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CROCCP3Q8IVE0 287 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ZDHHC21Q8IVQ6 265 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 FAM71AQ8IYT1 594 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 FAM58AQ8N1B3 248 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CYP4Z2PQ8N1L4 340 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ARHGAP24Q8N264 748 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 C1orf52Q8N6N3 182 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 LRRC17Q8N6Y2 441 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PI4KAP1Q8N8J0 262 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 CCNYQ8ND76 341 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CSNK2A3Q8NEV1 391 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 OR10A7Q8NGE5 316 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 OR4D10Q8NGI6 311 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 OR6X1Q8NH79 312 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 OR2V1Q8NHB1 315 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 NFKBIDQ8NI38 313 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 LRRC20Q8TCA0 184 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 DTX3LQ8TDB6 740 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 RNASE8Q8TDE3 154 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 P3H4Q92791 437 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 TAMM41Q96BW9 452 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 TMCO6Q96DC7 493 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ERLEC1Q96DZ1 483 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 MTERF3Q96E29 417 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 EEF2KMTQ96G04 330 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 TMEM80Q96HE8 168 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 GRAMD2BQ96HH9 432 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 OXNAD1Q96HP4 312 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 FAM210BQ96KR6 192 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 RNF145Q96MT1 663 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PANX1Q96RD7 426 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ZNF607Q96SK3 696 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PCDHB18PQ96TA0 734 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 C12orf57Q99622 126 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CHP1Q99653 195 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 MAPKAP1Q9BPZ7 522 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 C17orf62Q9BQA9 187 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CENPKQ9BS16 269 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PHF7Q9BWX1 381 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 ZYG11BQ9C0D3 744 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ZMYND12Q9H0C1 365 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 METTL9Q9H1A3 318 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SLC25A18Q9H1K4 315 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 GAL3ST2Q9H3Q3 398 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 LRRN3Q9H3W5 708 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SAV1Q9H4B6 383 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 MED20Q9H944 212 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 MARCH7Q9H992 704 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 S100A14Q9HCY8 104 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CCNB1IP1Q9NPC3 277 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 XPNPEP1Q9NQW7 623 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ZCCHC3Q9NUD5 404 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 ZNF701Q9NV72 531 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 OSER1Q9NX31 292 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 COA4Q9NYJ1 87 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 GTSE1Q9NYZ3 720 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 UVRAGQ9P2Y5 699 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 DBNLQ9UJU6 430 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 SARDHQ9UL12 918 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 POFUT2Q9Y2G5 429 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PADI2Q9Y2J8 665 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.24□□□□□ -2.05
XRN1-211ENST00000477237 NDUFAF1Q9Y375 327 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 RHBDD3Q9Y3P4 386 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 HYOU1Q9Y4L1 999 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 RIPK3Q9Y572 518 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 LIPGQ9Y5X9 500 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CPQQ9Y646 472 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 MRPS18BQ9Y676 258 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 V9GYQ6 96 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 NCOA1Q15788 1441 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 FAM135BQ49AJ0 1406 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SMARCA4P51532 1647 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 WNK3Q9BYP7 1800 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PLEKHH1Q9ULM0 1364 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ABCC4O15439 1325 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TDRD15B5MCY1 1934 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 A0A0A6YYC8 382 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 TRBV2A0A0J9YWF9 115 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TEX13CA0A0J9YWL9 993 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 A0A1B0GUH1 482 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms