RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	TBCD	Q9BTW9	1192 aa		11.14	□□□□□ -0.63
SBF1-208	ENST00000477234	ANGPTL4	Q9BY76	406 aa		11.14	□□□□□ -0.63
SBF1-208	ENST00000477234	REXO4	Q9GZR2	422 aa	Known RBP	11.14	□□□□□ -0.63
SBF1-208	ENST00000477234	KLHL31	Q9H511	634 aa		11.14	□□□□□ -0.63
SBF1-208	ENST00000477234	BARX1	Q9HBU1	254 aa	Predicted RBP	11.14	□□□□□ -0.63
SBF1-208	ENST00000477234	WBP11	Q9Y2W2	641 aa	Known RBP	11.14	□□□□□ -0.63
SBF1-208	ENST00000477234	SLC6A5	Q9Y345	797 aa		11.14	□□□□□ -0.63
SBF1-208	ENST00000477234	CCL27	Q9Y4X3	112 aa		11.14	□□□□□ -0.63
SBF1-208	ENST00000477234	KDM4E	B2RXH2	506 aa	Predicted RBP	11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	TGFBR3L	H3BV60	316 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	HS3ST1	O14792	307 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	ABCB7	O75027	752 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	GUCY1B2	O75343	617 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	NID1	P14543	1247 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	RPL3	P39023	403 aa	Known RBP	11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	STT3A	P46977	705 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	MRPL19	P49406	292 aa	Known RBP	11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	FAM27E3	Q08E93	113 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	FOXF2	Q12947	444 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	CAPRIN1	Q14444	709 aa	Known RBP	11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	MAPRE2	Q15555	327 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	GALNT18	Q6P9A2	607 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	P4HA3	Q7Z4N8	544 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	ADGRE4P	Q86SQ3	457 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	MTDH	Q86UE4	582 aa	Known RBP	11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	NUDT13	Q86X67	352 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	METTL4	Q8N3J2	472 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	OR1J4	Q8NGS1	313 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	OR2T11	Q8NH01	316 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	TMEM41A	Q96HV5	264 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	FBXL20	Q96IG2	436 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	SHARPIN	Q9H0F6	387 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	PROK2	Q9HC23	129 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	MS4A12	Q9NXJ0	267 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	MCM8	Q9UJA3	840 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	DLGAP4	Q9Y2H0	992 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	PTGDR2	Q9Y5Y4	395 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	CAPN7	Q9Y6W3	813 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	CR1	P17927	2039 aa		11.13	□□□□□ -0.63
SBF1-208	ENST00000477234	GNG14	A0A1W2PPG7	69 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	SNPH	O15079	494 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	SIAH2	O43255	324 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	SPRY1	O43609	319 aa	Predicted RBP	11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	ZNF354A	O60765	605 aa	Predicted RBP	11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	IGKV3-11	P04433	115 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	TLX1	P31314	330 aa	Predicted RBP	11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	TIA1	P31483	386 aa	Known RBP eCLIP	11.12	□□□□□ -0.63	2e-6	■■■■□ 20
SBF1-208	ENST00000477234	SSR2	P43308	183 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	CLNS1A	P54105	237 aa	Known RBP	11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	TRA2B	P62995	288 aa	Known RBP	11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	IL23R	Q5VWK5	629 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	HLA-DQA1	Q5Y7H0	255 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	FAM91A1	Q658Y4	838 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	NOXRED1	Q6NXP6	359 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	LYPD8	Q6UX82	237 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	RNF111	Q6ZNA4	994 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	TRPM8	Q7Z2W7	1104 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	VN1R5	Q7Z5H4	357 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	MIER2	Q8N344	545 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	C1orf52	Q8N6N3	182 aa	Known RBP	11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	ROBO4	Q8WZ75	1007 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	TP53INP1	Q96A56	240 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	GNRHR2	Q96P88	292 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	ZBTB18	Q99592	522 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	TUBA1C	Q9BQE3	449 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	MRPL1	Q9BYD6	325 aa	Known RBP	11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	BRINP2	Q9C0B6	783 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	OR51B5	Q9H339	312 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	AIG1	Q9NVV5	245 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	ZIM2	Q9NZV7	527 aa		11.12	□□□□□ -0.63
SBF1-208	ENST00000477234	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234		A0A1W2PNV4	684 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	PCDH7	O60245	1069 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	TNFSF13	O75888	250 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	ETHE1	O95571	254 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	ANXA4	P09525	319 aa	Predicted RBP	11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	MNAT1	P51948	309 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	HNRNPF	P52597	415 aa	Known RBP	11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	PLA2G16	P53816	162 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	EEFSEC	P57772	596 aa	Known RBP	11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	ZNF763	Q0D2J5	394 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	KIAA0040	Q15053	153 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	DPY19L1	Q2PZI1	675 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	RFTN2	Q52LD8	501 aa	Predicted RBP	11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	PDCD4	Q53EL6	469 aa	Known RBP	11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	TIGD3	Q6B0B8	471 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	OR4C11	Q6IEV9	310 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	CYP20A1	Q6UW02	462 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	IKBIP	Q70UQ0	350 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	COMMD6	Q7Z4G1	85 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	C9orf40	Q8IXQ3	194 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	GCNT2	Q8N0V5	402 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	ZNF321P	Q8N8H1	164 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	TMEM52	Q8NDY8	209 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	SPPL2A	Q8TCT8	520 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	TSPEAR	Q8WU66	669 aa		11.11	□□□□□ -0.63
SBF1-208	ENST00000477234	ERP27	Q96DN0	273 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms