RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 FCRL5Q96RD9 977 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SUV39H2Q9H5I1 410 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 DCAF13Q9NV06 445 aaKnown RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 CPNE7Q9UBL6 633 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PSORS1C1Q9UIG5 152 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SERTAD3Q9UJW9 196 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 C17orf113A0A1B0GUU1 675 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 CSF3P09919 207 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 LSSP48449 732 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 CX3CR1P49238 355 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 RNF4P78317 190 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 POU4F3Q15319 338 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 FAM198BQ6UWH4 519 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 LIPIQ6XZB0 460 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 COMMD7Q86VX2 200 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ARL14EPQ8N8R7 260 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 NLGN2Q8NFZ4 835 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 OR8J1Q8NGP2 316 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 NFKBIDQ8NI38 313 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 CNOT9Q92600 299 aaKnown RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 KLK6Q92876 244 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 FAM46BQ96A09 425 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PLD4Q96BZ4 506 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF419Q96HQ0 510 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 OR8D2Q9GZM6 311 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 GABARAPL1Q9H0R8 117 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PPA2Q9H2U2 334 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ACTL8Q9H568 366 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SERTAD4Q9NUC0 356 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ADAM18Q9Y3Q7 739 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PLA2G10O15496 165 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 NIPSNAP2O75323 286 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 DIRAS1O95057 198 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 WISP3O95389 354 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 CNOT4O95628 575 aaKnown RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 IRF2P14316 349 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 RAC2P15153 192 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PRDX3P30048 256 aaKnown RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 HK3P52790 923 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 RAB8AP61006 207 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PPIGQ13427 754 aaKnown RBP eCLIP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SAXO2Q658L1 398 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 RPL13AP3Q6NVV1 102 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 TAC4Q86UU9 113 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 OR2T35Q8NGX2 323 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 ARHGAP9Q9BRR9 750 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-209ENST00000475639 PRODH2Q9UF12 536 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 SLC22A14Q9Y267 594 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 KLK4Q9Y5K2 254 aa10.91□□□□□ -0.66
U2AF1-209ENST00000475639 C20orf202A1L168 122 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 C2orf72A6NCS6 295 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 OR6C65A6NJZ3 312 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 SYN3O14994 580 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 MTHFD2P13995 350 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 MSX1P28360 303 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 EVI2BP34910 448 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 EEF1A2Q05639 463 aaKnown RBP10.9□□□□□ -0.66
U2AF1-209ENST00000475639 MALLQ13021 153 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 PRAMEF19Q5SWL8 479 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 OTUD1Q5VV17 481 aaPredicted RBP10.9□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF439Q8NDP4 499 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 OR8J3Q8NGG0 315 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 CDKN2AIPNLQ96HQ2 116 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 TXN2Q99757 166 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 TREX1Q9NSU2 369 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 DKKL1Q9UK85 242 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 NRXN2Q9P2S2 1712 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 A0A0U1RQK1 487 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 A0A1W2PPL8 197 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 MEGF11A6BM72 1044 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 CDK1P06493 297 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 UCHL1P09936 223 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 CD79BP40259 229 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 BTN1A1Q13410 526 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 UBXN2BQ14CS0 331 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 XKR7Q5GH72 579 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 FUT10Q6P4F1 479 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 CATSPERGQ6ZRH7 1159 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 S100A7AQ86SG5 101 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 ACBD7Q8N6N7 88 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 CCDC71LQ8N9Z2 235 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 OR52H1Q8NGJ2 320 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 THAP4Q8WY91 577 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 KCNJ9Q92806 393 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 MGLLQ99685 303 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 NPIPA2E9PIF3 369 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 NPIPA3F8WFD2 350 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 CCL16O15467 120 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 POP7O75817 140 aaKnown RBP10.9□□□□□ -0.66
U2AF1-209ENST00000475639 PRKAR1BP31321 381 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 TGM4P49221 684 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 CASP6P55212 293 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 FLYWCH1Q4VC44 716 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 SLC22A10Q63ZE4 541 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 RGMBQ6NW40 437 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF367Q7RTV3 350 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 ZFP82Q8N141 532 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 OR2T33Q8NG76 320 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 TERB2Q8NHR7 220 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms