RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 C6orf141Q5SZD1 244 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 KLHL17Q6TDP4 642 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SPESP1Q6UW49 350 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 FAM198BQ6UWH4 519 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 METTL7BQ6UX53 244 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CD300LGQ6UXG3 332 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TMIGD1Q6UXZ0 262 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 RPTNQ6XPR3 784 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SLC39A5Q6ZMH5 540 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SCARA5Q6ZMJ2 495 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 RANBP3LQ86VV4 465 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 THOC6Q86W42 341 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 AMIGO3Q86WK7 504 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 VRK3Q8IV63 474 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 ZFPM1Q8IX07 1006 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 C15orf54Q8N8G6 183 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 OR5R1Q8NH85 324 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 ACTL9Q8TC94 416 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MZB1Q8WU39 189 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 STYXQ8WUJ0 223 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 XAGE5Q8WWM1 108 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 LPAR1Q92633 364 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 NT5C3BQ969T7 300 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TRMT61AQ96FX7 289 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 AURKBQ96GD4 344 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CELF6Q96J87 481 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 ZNF479Q96JC4 524 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 APOLD1Q96LR9 279 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SIGLEC11Q96RL6 698 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MCCC1Q96RQ3 725 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CNPPD1Q9BV87 410 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 POLDIP3Q9BY77 421 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 PCBD2Q9H0N5 130 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CSTL1Q9H114 145 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MMP28Q9H239 520 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 OR52A5Q9H2C5 316 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 NXF3Q9H4D5 531 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 EPHX3Q9H6B9 360 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SMURF2Q9HAU4 748 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MID1IP1Q9NPA3 183 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 KRCC1Q9NPI7 259 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 XPNPEP3Q9NQH7 507 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 EIF2B3Q9NR50 452 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 AGPAT4Q9NRZ5 378 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TBC1D13Q9NVG8 400 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MTMR10Q9NXD2 777 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SCN3BQ9NY72 215 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 PDP1Q9P0J1 537 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 GCNT4Q9P109 453 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CACNG4Q9UBN1 327 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TRPC4Q9UBN4 977 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 C3orf18Q9UK00 162 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 AJAP1Q9UKB5 411 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SLC27A6Q9Y2P4 619 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 FBXO7Q9Y3I1 522 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CLDN16Q9Y5I7 305 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SPACA6W5XKT8 324 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 PTPRFP10586 1907 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 ITGB4P16144 1822 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TEX13DA0A0J9YY54 714 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 A0A0U1RQS6 177 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 A0A1W2PP18 115 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TMEM72A0PK05 275 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 MEX3AA1L020 520 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 DISC1C4P0D8 188 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 E5RJQ4 531 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 NPIPA7E9PJI5 369 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 M0R143 59 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 IMPA2O14732 288 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 SLC16A3O15427 465 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 CFLARO15519 480 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 DNAJB6O75190 326 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 MPC2O95563 127 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 C6orf47O95873 294 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 LDLRP01130 860 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 HPXP02790 462 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 RD3LP0DJH9 198 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 NPIPA8P0DM63 369 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 HAPLN1P10915 354 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 INSRRP14616 1297 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 CHRNB2P17787 502 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 PTNP21246 168 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TBXA2RP21731 343 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 CCNOP22674 350 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 EPHA8P29322 1005 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 ICAM3P32942 547 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 GDNFP39905 211 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 CYP2J2P51589 502 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 ARSEP51690 589 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 NCS1P62166 190 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 YWHAHQ04917 246 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 IL24Q13007 206 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 HEPACAMQ14CZ8 416 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 RBMS2Q15434 407 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 INPP5JQ15735 1006 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 RAB30Q15771 203 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 LEMD1Q68G75 181 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 GCNT7Q6ZNI0 430 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 QSOX2Q6ZRP7 698 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms