RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 OR14A16Q8NHC5 309 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 C16orf52Q8NHV5 167 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 PTPMT1Q8WUK0 201 aaPredicted RBP9.47□□□□□ -0.89
PCCB-213ENST00000475214 TSLPQ969D9 159 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 SENP5Q96HI0 755 aaPredicted RBP9.47□□□□□ -0.89
PCCB-213ENST00000475214 SLC46A1Q96NT5 459 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 WFDC6Q9BQY6 131 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 GABARAPL3Q9BY60 117 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 GRIP2Q9C0E4 1043 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 POLR2J2Q9GZM3 115 aaKnown RBP9.47□□□□□ -0.89
PCCB-213ENST00000475214 POLR2J3Q9H1A7 115 aaKnown RBP9.47□□□□□ -0.89
PCCB-213ENST00000475214 C14orf105Q9NVL8 296 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 FBXO34Q9NWN3 711 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 MKL2Q9ULH7 1088 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 OR10H1Q9Y4A9 318 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 GMPPBQ9Y5P6 360 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 HSPE1-MOB4S4R3N1 261 aa9.47□□□□□ -0.89
PCCB-213ENST00000475214 ASCC3Q8N3C0 2202 aaKnown RBP9.46□□□□□ -0.89
PCCB-213ENST00000475214 IGLV3-12A0A075B6K2 115 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 A6NHS1 94 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 POLR1CO15160 346 aaPredicted RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 OR10H3O60404 316 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 SEMA7AO75326 666 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 SMNDC1O75940 238 aaKnown RBP eCLIP9.46□□□□□ -0.9
PCCB-213ENST00000475214 CLPTM1O96005 669 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 ADAP00813 363 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 HEXBP07686 556 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 ZGLP1P0C6A0 271 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 CYP4B1P13584 511 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 NID1P14543 1247 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 AGXTP21549 392 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 CBLP22681 906 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 POLR2IP36954 125 aaKnown RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 RFX3P48380 749 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 CLK3P49761 638 aaKnown RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 UGT2B15P54855 530 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 SLC37A1P57057 533 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 DCAF7P61962 342 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 IL5RAQ01344 420 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 ZFP36L1Q07352 338 aaKnown RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 ST3GAL3Q11203 375 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 TRAM2Q15035 370 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 NPTX1Q15818 432 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 DECR1Q16698 335 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 RBM48Q5RL73 367 aaKnown RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 RNF220Q5VTB9 566 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 HLA-DQA1Q5Y7H0 255 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 ISLR2Q6UXK2 745 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 NPSR1Q6W5P4 371 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 PLEKHM3Q6ZWE6 761 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 OVCH1Q7RTY7 1134 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 PRSS58Q8IYP2 241 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 CLIP4Q8N3C7 705 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 AQP11Q8NBQ7 271 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 MORN4Q8NDC4 146 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 OR9Q2Q8NGE9 314 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 STT3BQ8TCJ2 826 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 SLC2A12Q8TD20 617 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 ADAMTS14Q8WXS8 1223 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 SLC38A4Q969I6 547 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 MCHR1Q99705 422 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 NIPSNAP1Q9BPW8 284 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 ITPAQ9BY32 194 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 OR8D2Q9GZM6 311 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 VN1R1Q9GZP7 353 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 ANKRD19PQ9H560 264 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 RLIMQ9NVW2 624 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 OCIAD1Q9NX40 245 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 AKAP7Q9P0M2 348 aaPredicted RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 COPS7AQ9UBW8 275 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 CTSFQ9UBX1 484 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 MRTO4Q9UKD2 239 aaKnown RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 CBLCQ9ULV8 474 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 GPR55Q9Y2T6 319 aaPredicted RBP9.46□□□□□ -0.9
PCCB-213ENST00000475214 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 NINQ8N4C6 2090 aa9.46□□□□□ -0.9
PCCB-213ENST00000475214 COL5A1P20908 1838 aaPredicted RBP9.45□□□□□ -0.9
PCCB-213ENST00000475214 A0A087WXM4 84 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 NPIPA5A0A0B4J1W7 369 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 SH3PXD2BA1X283 911 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 DPPA5A6NC42 116 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 CPSF4LA6NMK7 179 aaKnown RBP9.45□□□□□ -0.9
PCCB-213ENST00000475214 NPIPA7E9PJI5 369 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 PEX12O00623 359 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 FRS3O43559 492 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 CPNE3O75131 537 aaKnown RBP9.45□□□□□ -0.9
PCCB-213ENST00000475214 CYP7B1O75881 506 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 OR5F1O95221 314 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 TIAF1O95411 115 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 ONECUT2O95948 504 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 GASTP01350 101 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 CLPSP04118 112 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 FTH1P19P0C7X4 201 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 SMIM18P0DKX4 95 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 NPIPA8P0DM63 369 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 CT45A8P0DMV1 189 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 CT45A9P0DMV2 189 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 ATP6V1B1P15313 513 aa9.45□□□□□ -0.9
PCCB-213ENST00000475214 SPINK2P20155 84 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms