RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SCDO00767 359 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 NDUFB5O43674 189 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 GMFGO60234 142 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 CLDN14O95500 239 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 ANGPTL1O95841 491 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 ACTL6AO96019 429 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 UQCRC2P22695 453 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 HTR1EP28566 365 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 LCN1P31025 176 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 PTGER4P35408 488 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 CHI3L1P36222 383 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 GAS1P54826 345 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 DSCR4P56555 118 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 WNT3P56703 355 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 NUP107P57740 925 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 CRYZQ08257 329 aaKnown RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 GSTA3Q16772 222 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 VASNQ6EMK4 673 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 AAGABQ6PD74 315 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 GLB1L3Q8NCI6 653 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 SLC35G5Q96KT7 338 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 SFXN2Q96NB2 322 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 UGT2B28Q9BY64 529 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 OR2B2Q9GZK3 357 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 SLCO1B3Q9NPD5 702 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 UBQLN4Q9NRR5 601 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 GPATCH2Q9NW75 528 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 RPH3AQ9Y2J0 694 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 GPR45Q9Y5Y3 372 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 CYSRT1A8MQ03 144 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 C9JVG2 144 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 FAM47E-STBD1D6RA91 191 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 POLR3GO15318 223 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 SLC22A3O75751 556 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 SASH3O75995 380 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 TGDSO95455 350 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 TBXA2RP21731 343 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 DGKQP52824 942 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 STX1BP61266 288 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 LRRC74AQ0VAA2 488 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 SP5Q6BEB4 398 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 EPGNQ6UW88 154 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 MAVSQ7Z434 540 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 ULK2Q8IYT8 1036 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 CLEC4FQ8N1N0 589 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 RPRMLQ8N4K4 120 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 MARVELD2Q8N4S9 558 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 TRIML2Q8N7C3 387 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 GATSQ8NAP1 163 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 ZNF527Q8NB42 609 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 OR4C3Q8NH37 302 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 FAM110BQ8TC76 370 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 RNF138Q8WVD3 245 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 MAELQ96JY0 434 aaKnown RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 TEX37Q96LM6 180 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 OR7D2Q96RA2 312 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 OR52B2Q96RD2 323 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 PANX1Q96RD7 426 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 TTYH2Q9BSA4 534 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 HOXD1Q9GZZ0 328 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 CHST11Q9NPF2 352 aa12.93□□□□□ -0.34
VAMP4-203ENST00000474047 KLF2Q9Y5W3 355 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-203ENST00000474047 OXSR1O95747 527 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-203ENST00000474047 PGRP06401 933 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 HK1P19367 917 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 CHRNB4P30926 498 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 RPS26P62854 115 aaKnown RBP12.92□□□□□ -0.34
VAMP4-203ENST00000474047 PHC1P78364 1004 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 SRYQ05066 204 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 RCAN2Q14206 197 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 GANABQ14697 944 aaKnown RBP12.92□□□□□ -0.34
VAMP4-203ENST00000474047 PDCD4Q53EL6 469 aaKnown RBP12.92□□□□□ -0.34
VAMP4-203ENST00000474047 NHSL2Q5HYW2 709 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 DCST2Q5T1A1 773 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 ATAD3BQ5T9A4 648 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 MIER2Q8N344 545 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 OR2M3Q8NG83 312 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 OR5D16Q8NGK9 328 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 MAGEB18Q96M61 343 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 SLC35A5Q9BS91 424 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 TCF7L2Q9NQB0 619 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 EXD2Q9NVH0 621 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 FBXO34Q9NWN3 711 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 BTNL2Q9UIR0 455 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 RNF6Q9Y252 685 aa12.92□□□□□ -0.34
VAMP4-203ENST00000474047 MRPS18CQ9Y3D5 142 aaKnown RBP12.92□□□□□ -0.34
VAMP4-203ENST00000474047 C17orf51A8MQB3 221 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ALG1L2C9J202 215 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 H0Y3Z8 333 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 H3BNH8 94 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 AGR2O95994 175 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 IL6P05231 212 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 NGFRP08138 427 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 GLI4P10075 376 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 CASP9P55211 416 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 FLYWCH1Q4VC44 716 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 HSP90B2PQ58FF3 399 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 RAET1LQ5VY80 246 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 RTL6Q6ICC9 239 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms