RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 QPCTLQ9NXS2 382 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 SLAMF8Q9P0V8 285 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 ARMCX1Q9P291 453 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 LIPT1Q9Y234 373 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 C15orf41Q9Y2V0 281 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 SHANK1Q9Y566 2161 aa11.34□□□□□ -0.59
DDX56-209ENST00000473924 PRRC2CQ9Y520 2896 aaKnown RBP11.34□□□□□ -0.59
DDX56-209ENST00000473924 NPIPA5A0A0B4J1W7 369 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 LOC100653049A0A140TA62 436 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 TMEM247A6NEH6 219 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 EVPLLA8MZ36 301 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 ALG1L2C9J202 215 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 NPIPA7E9PJI5 369 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 SLC22A2O15244 555 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 NDUFB5O43674 189 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 KRT34O76011 436 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 WISP2O76076 250 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 WISP1O95388 367 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 ANGPTL1O95841 491 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 NGFRP08138 427 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 NPIPA8P0DM63 369 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 NR2F1P10589 423 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 ETFAP13804 333 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 DCTP40126 519 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 UQCRFS1P47985 274 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 GAS1P54826 345 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 DSTNP60981 165 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 C17orf67Q0P5P2 114 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 CYLC2Q14093 348 aaPredicted RBP11.33□□□□□ -0.6
DDX56-209ENST00000473924 EIF2S3LQ2VIR3 472 aaKnown RBP11.33□□□□□ -0.6
DDX56-209ENST00000473924 FNDC7Q5VTL7 733 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 HEPHL1Q6MZM0 1159 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 DHDDSQ86SQ9 333 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 MTDHQ86UE4 582 aaKnown RBP11.33□□□□□ -0.6
DDX56-209ENST00000473924 SNX32Q86XE0 403 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 DPP10Q8N608 796 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 WDSUB1Q8N9V3 476 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 GATSQ8NAP1 163 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 PRR7Q8TB68 274 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 DUSP19Q8WTR2 217 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 RNF138Q8WVD3 245 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 HHATLQ9HCP6 504 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 THUMPD1Q9NXG2 353 aaKnown RBP11.33□□□□□ -0.6
DDX56-209ENST00000473924 SLC25A37Q9NYZ2 338 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 VAPAQ9P0L0 249 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 P2RX2Q9UBL9 471 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 MKLN1Q9UL63 735 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 WDR45Q9Y484 360 aa11.33□□□□□ -0.6
DDX56-209ENST00000473924 TRGV5A0A0B4J1U4 118 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 A0A1B0GTH9 108 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 BBIP1A8MTZ0 92 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 H3BNH8 94 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 FCMRO60667 390 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 CELA3AP09093 270 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 ABOP16442 354 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 HOXB9P17482 250 aaPredicted RBP11.32□□□□□ -0.6
DDX56-209ENST00000473924 MVDP53602 400 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 ATP12AP54707 1039 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 HSF1Q00613 529 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 FADDQ13158 208 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 RGNQ15493 299 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 SYPL1Q16563 259 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 ARHGAP11AQ6P4F7 1023 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 APOOLQ6UXV4 268 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 OLIG3Q7RTU3 272 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 PHOSPHO1Q8TCT1 267 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 NTNG2Q96CW9 530 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 TRNT1Q96Q11 434 aaKnown RBP11.32□□□□□ -0.6
DDX56-209ENST00000473924 RTN4RQ9BZR6 473 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 ZNF350Q9GZX5 532 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 DSN1Q9H410 356 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 PTGES2Q9H7Z7 377 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 ACKR4Q9NPB9 350 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 POLE3Q9NRF9 147 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 DKKL1Q9UK85 242 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 ADAM21Q9UKJ8 722 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 CORO2BQ9UQ03 480 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 OSGIN2Q9Y236 505 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 ARL2BPQ9Y2Y0 163 aa11.32□□□□□ -0.6
DDX56-209ENST00000473924 BAHCC1Q9P281 2608 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 A0A1W2PQD3 144 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 C17orf51A8MQB3 221 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 GTPBP1O00178 669 aaKnown RBP11.31□□□□□ -0.6
DDX56-209ENST00000473924 FBP2O00757 339 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 MRASO14807 208 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 GMFGO60234 142 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 SUSD5O60279 629 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 HCN1O60741 890 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 H6PDO95479 791 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 IGHG3P01860 377 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 BCHEP06276 602 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 PTGS2P35354 604 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 GCKP35557 465 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
DDX56-209ENST00000473924 CASP6P55212 293 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 FUT5Q11128 374 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 GNA13Q14344 377 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 COQ5Q5HYK3 327 aa11.31□□□□□ -0.6
DDX56-209ENST00000473924 PDZK1Q5T2W1 519 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms